RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 POLR2CP19387 275 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-222ENST00000491867 SERPINB6P35237 376 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 CBSP35520 551 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 PCM1Q15154 2024 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 BOLA3Q53S33 107 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 PDPK2PQ6A1A2 396 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 MTFR2Q6P444 385 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 FAM83HQ6ZRV2 1179 aaPredicted RBP13.43□□□□□ -0.26
ATG4B-222ENST00000491867 AMZ2Q86W34 360 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 TMEM151BQ8IW70 566 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 OR2Y1Q8NGV0 311 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 HSPH1Q92598 858 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 GBP4Q96PP9 640 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 C17orf62Q9BQA9 187 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 ZFYVE1Q9HBF4 777 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 RBM22Q9NW64 420 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATG4B-222ENST00000491867 MYO1AQ9UBC5 1043 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 FBXL4Q9UKA2 621 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 POMT2Q9UKY4 750 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 TMPRSS11EQ9UL52 423 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 SHOC2Q9UQ13 582 aa13.43□□□□□ -0.26
ATG4B-222ENST00000491867 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 NSD1Q96L73 2696 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 C19orf84I3L1E1 186 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 AGPSO00116 658 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 CNOT3O75175 753 aaKnown RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 ALOX12BO75342 701 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 UMODP07911 640 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 HBQ1P09105 142 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 PIRTP0C851 137 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 MSL3P1P0C860 447 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 RARAP10276 462 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 LMAN1P49257 510 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 ZNF165P49910 485 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 TDGF1P3P51864 188 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 TYRO3Q06418 890 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 KLHL30Q0D2K2 578 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 TMEM115Q12893 351 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 XRCC4Q13426 336 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 GTF2H3Q13889 308 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 PRKD1Q15139 912 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 CCDC183Q5T5S1 534 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 C1orf189Q5VU69 101 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 PRAMEF13Q5VWM6 474 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 ZNF324BQ6AW86 544 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 GFRALQ6UXV0 394 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 TEKT4Q8WW24 435 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 PTERQ96BW5 349 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 MAGEB10Q96LZ2 347 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 NAT10Q9H0A0 1025 aaKnown RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 ISCUQ9H1K1 167 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 C1GALT1Q9NS00 363 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 RAD18Q9NS91 495 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 NFKBIL1Q9UBC1 381 aaPredicted RBP13.42□□□□□ -0.26
ATG4B-222ENST00000491867 SLC24A2Q9UI40 661 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 CDYLQ9Y232 598 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 COL6A5A8TX70 2615 aa13.42□□□□□ -0.26
ATG4B-222ENST00000491867 KCNJ13O60928 360 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 POP7O75817 140 aaKnown RBP13.41□□□□□ -0.26
ATG4B-222ENST00000491867 TLE4Q04727 773 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 DMPKQ09013 629 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 NFE2L1Q14494 772 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 SLC9A5Q14940 896 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 IRAK1BP1Q5VVH5 260 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 TXNRD3NBQ6F5E7 133 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 XKRXQ6PP77 449 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 TMEM207Q6UWW9 146 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 LRRC49Q8IUZ0 686 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 GDAP1Q8TB36 358 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 CHTF18Q8WVB6 975 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 NR4A3Q92570 626 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 MAML1Q92585 1016 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 C14orf79Q96F83 325 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 INSM2Q96T92 566 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-222ENST00000491867 ADGRE3Q9BY15 652 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 KLHL25Q9H0H3 589 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 EPS8L2Q9H6S3 715 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 KIR3DX1Q9H7L2 352 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 PCDH18Q9HCL0 1135 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 SLC6A20Q9NP91 592 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 IFT80Q9P2H3 777 aaPredicted RBP13.41□□□□□ -0.26
ATG4B-222ENST00000491867 NDOR1Q9UHB4 597 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 SH3BGRL2Q9UJC5 107 aa13.41□□□□□ -0.26
ATG4B-222ENST00000491867 NBEAL1Q6ZS30 2694 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 MAP3K7O43318 606 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 HLA-DQB2P05538 268 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 SKILP12757 684 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 ST6GAL1P15907 406 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 HLA-DPA1P20036 260 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 PBX1P40424 430 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 CD86P42081 329 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 CA7P43166 264 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 KIR3DL1P43629 444 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 SLC25A11Q02978 314 aaKnown RBP13.4□□□□□ -0.26
ATG4B-222ENST00000491867 PRKAA1Q13131 559 aa13.4□□□□□ -0.26
ATG4B-222ENST00000491867 PIGHQ14442 188 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms