RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SUN1O94901 812 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 EBLN1P0CF75 366 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 KPNA2P52292 529 aaKnown RBP17.53■□□□□ 0.4
HMGN1-219ENST00000491183 SIX1Q15475 284 aaPredicted RBP17.53■□□□□ 0.4
HMGN1-219ENST00000491183 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
HMGN1-219ENST00000491183 FBXO38Q6PIJ6 1188 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 OOSP2Q86WS3 158 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 PPP1R3BQ86XI6 285 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 GLIS1Q8NBF1 620 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 PHC3Q8NDX5 983 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 OR4E2Q8NGC2 313 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 FERD3LQ96RJ6 166 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 GEMIN8Q9NWZ8 242 aaKnown RBP17.53■□□□□ 0.4
HMGN1-219ENST00000491183 ZNF148Q9UQR1 794 aa17.53■□□□□ 0.4
HMGN1-219ENST00000491183 UBA6A0AVT1 1052 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-219ENST00000491183 ERI2A8K979 691 aaKnown RBP17.52■□□□□ 0.4
HMGN1-219ENST00000491183 GOLGA6L6A8MZA4 724 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 J3QKU1 62 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 ARHGAP6O43182 974 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 ZIC2O95409 532 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-219ENST00000491183 IFNB1P01574 187 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 PRKAR1AP10644 381 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 SFTPCP11686 197 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 POLR2CP19387 275 aaPredicted RBP17.52■□□□□ 0.4
HMGN1-219ENST00000491183 MSNP26038 577 aaKnown RBP17.52■□□□□ 0.4
HMGN1-219ENST00000491183 NDUFS1P28331 727 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 OAS2P29728 719 aaKnown RBP17.52■□□□□ 0.4
HMGN1-219ENST00000491183 FOXN2P32314 431 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 DLSTP36957 453 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 FDFT1P37268 417 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 CDC20Q12834 499 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 CDH17Q12864 832 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 TUBB3Q13509 450 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 KRT33BQ14525 404 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 RPS6KA1Q15418 735 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 SKIDA1Q1XH10 827 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 PWWP2BQ6NUJ5 590 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 KMT5CQ86Y97 462 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 D2HGDHQ8N465 521 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 DNAAF3Q8N9W5 541 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 ACVR1CQ8NER5 493 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 STARD8Q92502 1023 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 CATSPER2Q96P56 530 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 PDE7BQ9NP56 450 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 SMARCAL1Q9NZC9 954 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 SLC2A6Q9UGQ3 507 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 LNPEPQ9UIQ6 1025 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 CROTQ9UKG9 612 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 HEBP2Q9Y5Z4 205 aa17.52■□□□□ 0.4
HMGN1-219ENST00000491183 ZSCAN5DPP0CG00 497 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 PREPP48147 710 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 CD151P48509 253 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 POLE2P56282 527 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 HSD11B2P80365 405 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 NFKB2Q00653 900 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 ACY1Q03154 408 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 RPA4Q13156 261 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 SEMA5AQ13591 1074 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 ATP1A1-AS1Q5TC04 95 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 ARMC6Q6NXE6 501 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 C16orf46Q6P387 395 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 OR13J1Q8NGT2 312 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 HDAC10Q969S8 669 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 STAMBPL1Q96FJ0 436 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 ZNF778Q96MU6 729 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 FCRL4Q96PJ5 515 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 ALS2CR12Q96Q35 445 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 AKIRIN1Q9H9L7 192 aaPredicted RBP17.51■□□□□ 0.39
HMGN1-219ENST00000491183 CASS4Q9NQ75 786 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 RAB6BQ9NRW1 208 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 FGF21Q9NSA1 209 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 RARRES3Q9UL19 164 aa17.51■□□□□ 0.39
HMGN1-219ENST00000491183 IFRD1O00458 451 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-219ENST00000491183 BTN3A3O00478 584 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 AP2A2O94973 939 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 ZBTB11O95625 1053 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-219ENST00000491183 TCN2P20062 427 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 RPL22P35268 128 aaKnown RBP17.5■□□□□ 0.39
HMGN1-219ENST00000491183 NSG1P42857 185 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 CCR10P46092 362 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 ARL4DP49703 201 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 BOP1Q14137 746 aaKnown RBP17.5■□□□□ 0.39
HMGN1-219ENST00000491183 ITIH4Q14624 930 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 CRTC2Q53ET0 693 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-219ENST00000491183 TSTD2Q5T7W7 516 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 PPP1R21Q6ZMI0 780 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 ZNF662Q6ZS27 426 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 BPHLQ86WA6 291 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-219ENST00000491183 OR52E1Q8NGJ3 308 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 LCN9Q8WX39 176 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 TFGQ92734 400 aaPredicted RBP17.5■□□□□ 0.39
HMGN1-219ENST00000491183 RANBP9Q96S59 729 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 SLC25A18Q9H1K4 315 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 ADNPQ9H2P0 1102 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 SRMSQ9H3Y6 488 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 MVB12BQ9H7P6 319 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 VPS37BQ9H9H4 285 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 POMT2Q9UKY4 750 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 PADI1Q9ULC6 663 aa17.5■□□□□ 0.39
HMGN1-219ENST00000491183 HEATR9A2RTY3 570 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms