RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 AXIN1O15169 862 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 NPHS1O60500 1241 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 NDUFS2O75306 463 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 SUPT3HO75486 399 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 FSBPO95073 299 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 MATN4O95460 622 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 PDGFBP01127 241 aaPredicted RBP13.87□□□□□ -0.19
VPS26A-205ENST00000489656 IMPDH1P20839 514 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 RABIFP47224 123 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 HK3P52790 923 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 ALDH18A1P54886 795 aaKnown RBP13.87□□□□□ -0.19
VPS26A-205ENST00000489656 CLDN2P57739 230 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 CDKL1Q00532 357 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 TGFBIQ15582 683 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 SLC36A4Q6YBV0 504 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 ZCCHC23Q6ZST2 131 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 AMZ2Q86W34 360 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 FAM160A2Q8N612 972 aaPredicted RBP13.87□□□□□ -0.19
VPS26A-205ENST00000489656 FRMD1Q8N878 549 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 RLN3Q8WXF3 142 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 WDR92Q96MX6 357 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 MYOCQ99972 504 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 C1QTNF3Q9BXJ4 246 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 SLC12A9Q9BXP2 914 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 PITPNM3Q9BZ71 974 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 DRC3Q9H069 523 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 SLCO1B3Q9NPD5 702 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 PRMT8Q9NR22 394 aaPredicted RBP13.87□□□□□ -0.19
VPS26A-205ENST00000489656 FGFR1OP2Q9NVK5 253 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 NCKIPSDQ9NZQ3 722 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.87□□□□□ -0.19
VPS26A-205ENST00000489656 ADAMTS6Q9UKP5 1117 aa13.87□□□□□ -0.19
VPS26A-205ENST00000489656 PRR19A6NJB7 356 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 METTL12A8MUP2 240 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 PI15O43692 258 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 PSIP1O75475 530 aaKnown RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 TGDSO95455 350 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 FUCA1P04066 466 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 TDGF1P13385 188 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 SLC1A6P48664 564 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 ABCE1P61221 599 aaKnown RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 HERVK_113P63132 956 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 GALNT1Q10472 559 aaPredicted RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 RCN2Q14257 317 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 USP39Q53GS9 565 aaKnown RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 PYCR3Q53H96 274 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 METTL2BQ6P1Q9 378 aaKnown RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 CRTC3Q6UUV7 619 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 FAM47EQ6ZV65 393 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 FRA10AC1Q70Z53 315 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 RAB44Q7Z6P3 723 aaPredicted RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 CPLX4Q7Z7G2 160 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 CFAP206Q8IYR0 622 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 FBXO39Q8N4B4 442 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 PTGR2Q8N8N7 351 aaPredicted RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 FBXO15Q8NCQ5 510 aaPredicted RBP13.86□□□□□ -0.19
VPS26A-205ENST00000489656 OR56A4Q8NGH8 313 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 DLG3Q92796 817 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 CNDP1Q96KN2 507 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 TMEM237Q96Q45 408 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 ERVK-6Q9BXR3 956 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 PARVBQ9HBI1 364 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 HAO1Q9UJM8 370 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 KMT2EQ8IZD2 1858 aa13.86□□□□□ -0.19
VPS26A-205ENST00000489656 PRSS38A1L453 326 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 H0Y8X5 98 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 H3BM21 787 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 FFAR2O15552 330 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 GFAPP14136 432 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 VCLP18206 1134 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 CYP2A7P20853 494 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 CD27P26842 260 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 HTR1BP28222 390 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 PBLDP30039 288 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 PREPP48147 710 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 PXNP49023 591 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 CLCNKAP51800 687 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 NAGLUP54802 743 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 AP1S2P56377 157 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 SETDB1Q15047 1291 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 PHKG1Q16816 387 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 ZNF678Q5SXM1 525 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 METRNLQ641Q3 311 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 SULT1C3Q6IMI6 304 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 UBE2R2Q712K3 238 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 PIGWQ7Z7B1 504 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 GALNT13Q8IUC8 556 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 LILRA3Q8N6C8 439 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 BCAS4Q8TDM0 211 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 ZNF473Q8WTR7 871 aaKnown RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 UBTD2Q8WUN7 234 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 EXT2Q93063 718 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 PHF21BQ96EK2 531 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 UHRF1Q96T88 793 aaPredicted RBP13.85□□□□□ -0.19
VPS26A-205ENST00000489656 SORT1Q99523 831 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 TRMOQ9BU70 441 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 C20orf27Q9GZN8 174 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 OR52A5Q9H2C5 316 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 CYP4F12Q9HCS2 524 aa13.85□□□□□ -0.19
VPS26A-205ENST00000489656 FGF22Q9HCT0 170 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms