RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 FRMD7Q6ZUT3 714 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 UBE2R2Q712K3 238 aaPredicted RBP21.21■□□□□ 0.99
SMC4-221ENST00000489573 CFAP206Q8IYR0 622 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 OXR1Q8N573 874 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 CAMKK1Q8N5S9 505 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 PDPRQ8NCN5 879 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 RLN3Q8WXF3 142 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 ASB11Q8WXH4 323 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 GPR174Q9BXC1 333 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 RMI1Q9H9A7 625 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 SLC17A4Q9Y2C5 497 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 PRKAB1Q9Y478 270 aa21.21■□□□□ 0.99
SMC4-221ENST00000489573 DOCK9Q9BZ29 2069 aa21.2■□□□□ 0.99
SMC4-221ENST00000489573 POM121BA6NF01 834 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 KMOO15229 486 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 SUPT7LO94864 414 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 SIX3O95343 332 aaPredicted RBP21.2■□□□□ 0.98
SMC4-221ENST00000489573 IGHV4-34P06331 123 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 CHRNGP07510 517 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 CCR10P46092 362 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 CCR3P51677 355 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 AMZ2Q86W34 360 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 LSMEM2Q8N112 164 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 PIWIL2Q8TC59 973 aaKnown RBP21.2■□□□□ 0.98
SMC4-221ENST00000489573 TRMOQ9BU70 441 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 SLC12A9Q9BXP2 914 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 GSTO2Q9H4Y5 243 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 MARCOQ9UEW3 520 aaPredicted RBP21.2■□□□□ 0.98
SMC4-221ENST00000489573 CA5BQ9Y2D0 317 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 RAP2CQ9Y3L5 183 aa21.2■□□□□ 0.98
SMC4-221ENST00000489573 KLHL33A6NCF5 533 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 H3BM21 787 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 GFYI3L273 518 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 MATN4O95460 622 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 CEACAM5P06731 702 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 EEF1DP29692 281 aaKnown RBP21.19■□□□□ 0.98
SMC4-221ENST00000489573 MAPK9P45984 424 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 PXNP49023 591 aaPredicted RBP21.19■□□□□ 0.98
SMC4-221ENST00000489573 NAA20P61599 178 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 PRKAA1Q13131 559 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 XKR5Q6UX68 686 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 GCNT7Q6ZNI0 430 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 RASGRP3Q8IV61 690 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 RFWD2Q8NHY2 731 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 EGFL8Q99944 293 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 C1QTNF3Q9BXJ4 246 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 TRIM54Q9BYV2 358 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 ILKAPQ9H0C8 392 aaPredicted RBP21.19■□□□□ 0.98
SMC4-221ENST00000489573 PARVBQ9HBI1 364 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 DMTF1Q9Y222 760 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 PDE10AQ9Y233 779 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 PABPN1LA6NDY0 278 aaKnown RBP21.19■□□□□ 0.98
SMC4-221ENST00000489573 LRRC14BA6NHZ5 514 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 GUCA1CO95843 209 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 RPS17P08708 135 aaKnown RBP21.19■□□□□ 0.98
SMC4-221ENST00000489573 KITP10721 976 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 CYP2A7P20853 494 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 MPSTP25325 297 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 NUDT1P36639 197 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 MAGEA9P43362 315 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 CXCL12P48061 93 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 PFN3P60673 137 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 CDKL1Q00532 357 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 NFE2L1Q14494 772 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 NFATC4Q14934 902 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 TJAP1Q5JTD0 557 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 CDKL4Q5MAI5 379 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 ANKS6Q68DC2 871 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 SULT1C3Q6IMI6 304 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 ZNF781Q8N8C0 355 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 ANKS4BQ8N8V4 417 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 TMEM145Q8NBT3 493 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 C10orf82Q8WW14 230 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 BIRC7Q96CA5 298 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 BMFQ96LC9 184 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 DPEP2Q9H4A9 486 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 EBF2Q9HAK2 575 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 EML4Q9HC35 981 aaKnown RBP21.19■□□□□ 0.98
SMC4-221ENST00000489573 PNPOQ9NVS9 261 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 ZNHIT2Q9UHR6 403 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 HAO1Q9UJM8 370 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 ARL2BPQ9Y2Y0 163 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 HS3ST3A1Q9Y663 406 aa21.19■□□□□ 0.98
SMC4-221ENST00000489573 PRAMEF26H0Y7S4 382 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 H0Y8X5 98 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 KELP23276 732 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 PDHA2P29803 388 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 RPIAP49247 311 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 AGTR2P50052 363 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 SIGLEC14Q08ET2 396 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 GALNT1Q10472 559 aaPredicted RBP21.18■□□□□ 0.98
SMC4-221ENST00000489573 ABRQ12979 859 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 RPA4Q13156 261 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 FAM83HQ6ZRV2 1179 aaPredicted RBP21.18■□□□□ 0.98
SMC4-221ENST00000489573 RPS27LQ71UM5 84 aaKnown RBP21.18■□□□□ 0.98
SMC4-221ENST00000489573 WDR75Q8IWA0 830 aaKnown RBP21.18■□□□□ 0.98
SMC4-221ENST00000489573 FAM160A2Q8N612 972 aaPredicted RBP21.18■□□□□ 0.98
SMC4-221ENST00000489573 FRMD1Q8N878 549 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 FOPNLQ96NB1 174 aa21.18■□□□□ 0.98
SMC4-221ENST00000489573 SLC23A2Q9UGH3 650 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms