RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ITM2AO43736 263 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 SNX2O60749 519 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 FUCA1P04066 466 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 HOXA6P31267 233 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 RABIFP47224 123 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 SLC1A6P48664 564 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 ABCE1P61221 599 aaKnown RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 OCRLQ01968 901 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 NFE2L1Q14494 772 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 TGFBIQ15582 683 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 PHKG1Q16816 387 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 Q6ZSR6 202 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 UBE2R2Q712K3 238 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.44■□□□□ 0.86
SND1-214ENST00000489417 CCNYL1Q8N7R7 359 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 OR56A4Q8NGH8 313 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 BCAS4Q8TDM0 211 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 DLG3Q92796 817 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 L3HYPDHQ96EM0 354 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 C7orf26Q96N11 449 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 ORAI3Q9BRQ5 295 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 TIMM29Q9BSF4 260 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 SLC12A9Q9BXP2 914 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 ZNF395Q9H8N7 513 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 RDH14Q9HBH5 336 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 FGF22Q9HCT0 170 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 TM7SF3Q9NS93 570 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 UTP6Q9NYH9 597 aaKnown RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 SUFUQ9UMX1 484 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 PRSS38A1L453 326 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 NCF1BA6NI72 391 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 NCF1CA8MVU1 366 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 STX16-NPEPL1H3BU86 382 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 STX16O14662 325 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 NPHS1O60500 1241 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 LYPLA1O75608 230 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 MATN4O95460 622 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 ENO2P09104 434 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 NCF1P14598 390 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 VCLP18206 1134 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 IMPDH1P20839 514 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 PDHA2P29803 388 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 MAPK9P45984 424 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 THOP1P52888 689 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 ALDH18A1P54886 795 aaKnown RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 RPL6Q02878 288 aaKnown RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 DMWDQ09019 674 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 ABRQ12979 859 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 RPA4Q13156 261 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 RCN2Q14257 317 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 PYCR3Q53H96 274 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 TPRG1LQ5T0D9 272 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 ENPP7Q6UWV6 458 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 FAM83HQ6ZRV2 1179 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 RASGRP3Q8IV61 690 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 DEFB119Q8N690 84 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 C20orf27Q9GZN8 174 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 DPEP2Q9H4A9 486 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 MRPL40Q9NQ50 206 aaKnown RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 ACSS2Q9NR19 701 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 PRMT8Q9NR22 394 aaPredicted RBP20.44■□□□□ 0.86
SND1-214ENST00000489417 DNAJC16Q9Y2G8 782 aa20.44■□□□□ 0.86
SND1-214ENST00000489417 GFYI3L273 518 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 NDUFAB1O14561 156 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 TNFRSF10CO14798 259 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 FFAR2O15552 330 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 CYP2A7P20853 494 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 CD27P26842 260 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 GNPDA1P46926 289 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 HERVK_113P63132 956 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 DMPKQ09013 629 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 CFAP157Q5JU67 520 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 ZNF678Q5SXM1 525 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 CHST15Q7LFX5 561 aaPredicted RBP20.43■□□□□ 0.86
SND1-214ENST00000489417 PDPRQ8NCN5 879 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 OR13H1Q8NG92 308 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 ZNF473Q8WTR7 871 aaKnown RBP20.43■□□□□ 0.86
SND1-214ENST00000489417 OR1E3Q8WZA6 343 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 FOPNLQ96NB1 174 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 ERVK-6Q9BXR3 956 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 TRIM54Q9BYV2 358 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 DRC3Q9H069 523 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 PARVBQ9HBI1 364 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 PDE10AQ9Y233 779 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 GPSM3Q9Y4H4 160 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 TRIOO75962 3097 aa20.43■□□□□ 0.86
SND1-214ENST00000489417 PLXND1Q9Y4D7 1925 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 CCDC163A0A0D9SF12 145 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 MAP3K13O43283 966 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 KCNJ13O60928 360 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 PSIP1O75475 530 aaKnown RBP20.42■□□□□ 0.86
SND1-214ENST00000489417 HSPA4LO95757 839 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 ACP5P13686 325 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 BCKDHBP21953 392 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 ARRB2P32121 409 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 SERPINB5P36952 375 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 SETDB1Q15047 1291 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 UNC50Q53HI1 259 aa20.42■□□□□ 0.86
SND1-214ENST00000489417 CGB2Q6NT52 195 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms