RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 HERPUD2Q9BSE4 406 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 NT5C1AQ9BXI3 368 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 TEX101Q9BY14 249 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 RAB33BQ9H082 229 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 TP63Q9H3D4 680 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 KCTD10Q9H3F6 313 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 HAUS4Q9H6D7 363 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 ACTR5Q9H9F9 607 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 PHPT1Q9NRX4 125 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 FAM207AQ9NSI2 230 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 CGNQ9P2M7 1197 aaKnown RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 TBC1D29Q9UFV1 150 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 EXOC7Q9UPT5 735 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 FRMD4BQ9Y2L6 1034 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 MED12Q93074 2177 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 TENM2Q9NT68 2774 aa7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 RAI1Q7Z5J4 1906 aaPredicted RBP7.23□□□□□ -1.25
EXOSC3-206ENST00000489414 KIR2DS5A0A0G2JLQ3 304 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 A0A0G2JNG1 304 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 TMEM89A2RUT3 159 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 CTAGE9A4FU28 777 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 SLC9B1P1A6NJY1 282 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 EIF3CLB5ME19 914 aaKnown RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 KIR2DS3K7RE56 304 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 RASGRF2O14827 1237 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 AKR1B10O60218 316 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 CLDN11O75508 207 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 WDPCPO95876 746 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 APOEP02649 317 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 CYP1A1P04798 512 aaPredicted RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 P4HA1P13674 534 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 GM2AP17900 193 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 AGXTP21549 392 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 PSMC2P35998 433 aaKnown RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 MMP12P39900 470 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 CCNFP41002 786 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 ZFP36L2P47974 494 aaKnown RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 ARSEP51690 589 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 DAOAP59103 153 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 HSD11B2P80365 405 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 KIR2DS5Q14953 304 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 OCLNQ16625 522 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 NFIL3Q16649 462 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 TCERG1LQ5VWI1 586 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 MLIPQ5VWP3 458 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 TRIM65Q6PJ69 517 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 GDPD4Q6W3E5 623 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 B4GALNT4Q76KP1 1039 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 RRAGAQ7L523 313 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 RYBPQ8N488 228 aaPredicted RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 AVL9Q8NBF6 648 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 DQX1Q8TE96 717 aaKnown RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 PSMF1Q92530 271 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 HPS1Q92902 700 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 ISG20Q96AZ6 181 aaKnown RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 FRMD6Q96NE9 622 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 RPRD1AQ96P16 312 aaPredicted RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 EIF3CQ99613 913 aaKnown RBP7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 KRTAP4-6Q9BYQ5 205 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 SIK3Q9Y2K2 1263 aa7.22□□□□□ -1.25
EXOSC3-206ENST00000489414 YLPM1P49750 1951 aaKnown RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 MALRD1Q5VYJ5 2156 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 FAM181BA6NEQ2 426 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 TUBAL3A6NHL2 446 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 KCNU1A8MYU2 1149 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 KIAA0391O15091 583 aaKnown RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 RRP9O43818 475 aaKnown RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ZMPSTE24O75844 475 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 LCA5LO95447 670 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 CD160O95971 181 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 RHOCP08134 193 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 CD63P08962 238 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 MYBL2P10244 700 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 KRT13P13646 458 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 F3P13726 295 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 PTGS2P35354 604 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 SNRPFP62306 86 aaKnown RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ARF5P84085 180 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 CDK3Q00526 305 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 SLC20A2Q08357 652 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 CETN1Q12798 172 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 KIF5AQ12840 1032 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 VEZF1Q14119 521 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 PYCR3Q53H96 274 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 TDRD12Q587J7 1177 aaKnown RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ZC3H12AQ5D1E8 599 aaKnown RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 DCAF17Q5H9S7 520 aaPredicted RBP7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ZNF569Q5MCW4 686 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 CCDC122Q5T0U0 273 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 AGAP9Q5VTM2 703 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 RETSATQ6NUM9 610 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ABHD17CQ6PCB6 329 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 KIRREL2Q6UWL6 708 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 GBP6Q6ZN66 633 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ARIH2OSQ8N7S6 290 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 AMER3Q8N944 861 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 SLC22A8Q8TCC7 542 aa7.21□□□□□ -1.26
EXOSC3-206ENST00000489414 ZFAND2BQ8WV99 257 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms