RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ZNF500O60304 480 aaPredicted RBP3.3□□□□□ -1.88
RFC4-213ENST00000489028 GJB3O75712 270 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 TBX6O95947 436 aaPredicted RBP3.3□□□□□ -1.88
RFC4-213ENST00000489028 CLPTM1O96005 669 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 IGLV1-44P01699 117 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 ITGA3P26006 1051 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 PSMB10P40306 273 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 CDH11P55287 796 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 TMF1P82094 1093 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 CXCL9Q07325 125 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 PLA2G7Q13093 441 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 AIMP2Q13155 320 aaKnown RBP3.3□□□□□ -1.88
RFC4-213ENST00000489028 TMEM187Q14656 261 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 P2RY6Q15077 328 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 DUSP28Q4G0W2 176 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 RAB41Q5JT25 222 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 TMED8Q6PL24 325 aaPredicted RBP3.3□□□□□ -1.88
RFC4-213ENST00000489028 CORO6Q6QEF8 472 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 INTS8Q75QN2 995 aaKnown RBP3.3□□□□□ -1.88
RFC4-213ENST00000489028 DNAJC22Q8N4W6 341 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 CPSF7Q8N684 471 aaKnown RBP3.3□□□□□ -1.88
RFC4-213ENST00000489028 ZNF383Q8NA42 475 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 GRHL3Q8TE85 626 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 WBP1Q96G27 269 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 ASCL2Q99929 193 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 RTP3Q9BQQ7 232 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 ACKR4Q9NPB9 350 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 BLOC1S4Q9NUP1 217 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 OSER1Q9NX31 292 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 CACNG5Q9UF02 275 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 RABGAP1Q9Y3P9 1069 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
RFC4-213ENST00000489028 IGLV9-49A0A0B4J1Y8 123 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 ELOVL7A1L3X0 281 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 HEPACAM2A8MVW5 462 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 ZNF197O14709 1029 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 CEACAM8P31997 349 aaPredicted RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 WNT5AP41221 380 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 NKX2-1P43699 371 aaPredicted RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 SLC15A1P46059 708 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 GEMIN4P57678 1058 aaKnown RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 B3GALT5-AS1P59052 145 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 RPS18P62269 152 aaKnown RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 LGALS3BPQ08380 585 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 SIM2Q14190 667 aaPredicted RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 ZFP69Q49AA0 526 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 SZRD1Q7Z422 152 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 ZNF485Q8NCK3 441 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 OR2AJ1Q8NGZ0 328 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 HSD17B8Q92506 261 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 FAM120BQ96EK7 910 aaKnown RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 ART5Q96L15 291 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 ZNF599Q96NL3 588 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 MYADMQ96S97 322 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 BARD1Q99728 777 aaKnown RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 TRAF4Q9BUZ4 470 aaPredicted RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 RTN4RQ9BZR6 473 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 SMARCAD1Q9H4L7 1026 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 FGF22Q9HCT0 170 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 A4GALTQ9NPC4 353 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 LARSQ9P2J5 1176 aaKnown RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 SUCLA2Q9P2R7 463 aaPredicted RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 HACL1Q9UJ83 578 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 ZNF215Q9UL58 517 aaPredicted RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 SLC7A7Q9UM01 511 aa3.29□□□□□ -1.88
RFC4-213ENST00000489028 MRPS28Q9Y2Q9 187 aaKnown RBP3.29□□□□□ -1.88
RFC4-213ENST00000489028 ITIH6Q6UXX5 1313 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 IGKV3D-15A0A087WSY6 115 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 A0A1W2PQ09 198 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 OR2A25A4D2G3 310 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 LRRC72A6NJI9 287 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 E9PI62 339 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 ZBED4O75132 1171 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 TRMUO75648 421 aaKnown RBP3.28□□□□□ -1.88
RFC4-213ENST00000489028 TPOP07202 933 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 HOXD13P35453 343 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 PSMC6P62333 389 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 MC1RQ01726 317 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 CREB5Q02930 508 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 ITGA9Q13797 1035 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 GTDC1Q4AE62 458 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 DCAF10Q5QP82 559 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 BHLHB9Q6PI77 547 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 SLC16A9Q7RTY1 509 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 HAUS6Q7Z4H7 955 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 LDB1Q86U70 411 aaPredicted RBP3.28□□□□□ -1.88
RFC4-213ENST00000489028 FAM114A1Q8IWE2 563 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 MAPK1IP1LQ8NDC0 245 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 OR1J1Q8NGS3 322 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 TMEM143Q96AN5 459 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 SAT2Q96F10 170 aaPredicted RBP3.28□□□□□ -1.88
RFC4-213ENST00000489028 OR6C1Q96RD1 312 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 PAFAH2Q99487 392 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 VN1R1Q9GZP7 353 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 DPAGT1Q9H3H5 408 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 GHITMQ9H3K2 345 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 ZHX3Q9H4I2 956 aa3.28□□□□□ -1.88
RFC4-213ENST00000489028 CHMP1AQ9HD42 196 aaPredicted RBP3.28□□□□□ -1.88
RFC4-213ENST00000489028 ECHDC1Q9NTX5 307 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms