RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 DHDHQ9UQ10 334 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 TRAF3IP3Q9Y228 551 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 LSM4Q9Y4Z0 139 aaKnown RBP3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CLIC4Q9Y696 253 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 CEPT1Q9Y6K0 416 aa3.34□□□□□ -1.87
PRPF4-203ENST00000488937 MST1RQ04912 1400 aa3.34□□□□□ -1.88
PRPF4-203ENST00000488937 A0A087WZY1 265 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 A0A0U1RQF3 1178 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 GOLGA6L7A0A1B0GV03 622 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 A0A1W2PPQ1 181 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 EME2A4GXA9 379 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ARHGAP42A6NI28 874 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 LRRIQ4A6NIV6 560 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM200CA6NKL6 621 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 KLRF2D3W0D1 207 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 H0YIN7 160 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 AP4M1O00189 453 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CLDN4O14493 209 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ATP2A1O14983 1001 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 KLK8O60259 260 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 IDH1O75874 414 aaKnown RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 MOCS3O95396 460 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CBX6O95503 412 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 PLGP00747 810 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 PGK2P07205 417 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CHRM2P08172 466 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 EEF1B2P24534 225 aaKnown RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 EPHB2P29323 1055 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CCND3P30281 292 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SLC6A6P31641 620 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 OTX2P32243 289 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 IDUAP35475 653 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ARHGAP25P42331 645 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 FPGSQ05932 587 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SREBF2Q12772 1141 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 OVGP1Q12889 678 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 HSPB3Q12988 150 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TSTA3Q13630 321 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 DDX39BQ13838 428 aaKnown RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TCTN1Q2MV58 587 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 FAM174BQ3ZCQ3 159 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 PDCD4Q53EL6 469 aaKnown RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 IFI44LQ53G44 452 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 LBHQ53QV2 105 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SGO1Q5FBB7 561 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 B3GNTL1Q67FW5 361 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ARHGAP17Q68EM7 881 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 KCTD11Q693B1 232 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 HIST2H2BCQ6DN03 193 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 HIST2H2BDQ6DRA6 164 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CASC4Q6P4E1 433 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 LCTLQ6UWM7 567 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ARSKQ6UWY0 536 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 WDR88Q6ZMY6 472 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ZBTB49Q6ZSB9 765 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 DET1Q7L5Y6 550 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TBC1D26Q86UD7 250 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 NOXA1Q86UR1 476 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF573Q86YE8 665 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ZDHHC23Q8IYP9 409 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 C12orf76Q8N812 135 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 BOLLQ8N9W6 283 aaKnown RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 DRAXINQ8NBI3 349 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SLC4A11Q8NBS3 891 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CLEC1AQ8NC01 280 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 OR52K1Q8NGK4 314 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF671Q8TAW3 534 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CAGE1Q8TC20 777 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SLC20A1Q8WUM9 679 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ADAMTS14Q8WXS8 1223 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CASP10Q92851 521 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 NACC2Q96BF6 587 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 R3HDM4Q96D70 268 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 MS4A10Q96PG2 267 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 OLFM1Q99784 485 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SSX3Q99909 188 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ADAM2Q99965 735 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 PIGQQ9BRB3 760 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TPPP3Q9BW30 176 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ACTRT3Q9BYD9 372 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 NUF2Q9BZD4 464 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 RAB17Q9H0T7 212 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TSPYL1Q9H0U9 437 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 MAGIXQ9H6Y5 334 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 RPF1Q9H9Y2 349 aaKnown RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 GPN1Q9HCN4 374 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 BPIFA1Q9NP55 256 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 KCNMB3Q9NPA1 279 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TCF7L2Q9NQB0 619 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM161AQ9NX61 479 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 GDAP2Q9NXN4 497 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 GAR1Q9NY12 217 aaKnown RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 FLRT1Q9NZU1 646 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 RNF7Q9UBF6 113 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SUN2Q9UH99 717 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SLC24A2Q9UI40 661 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 CCNL1Q9UK58 526 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 ASTN2O75129 1339 aaPredicted RBP3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SPATA31A5Q5VU36 1347 aa3.33□□□□□ -1.88
PRPF4-203ENST00000488937 SPATA31A7Q8IWB4 1347 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms