RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 DNASE1L3Q13609 305 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 SPARCL1Q14515 664 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 KRT33BQ14525 404 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 GSE1Q14687 1217 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 KCNAB1Q14722 419 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 ZNF658BQ4V348 819 aaPredicted RBP12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 TMTC4Q5T4D3 741 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 PWWP2BQ6NUJ5 590 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 DUS1LQ6P1R4 473 aaKnown RBP12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 C16orf46Q6P387 395 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 ZNF449Q6P9G9 518 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 TMEM139Q8IV31 216 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 FAM71DQ8N9W8 422 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 SLC35B2Q8TB61 432 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 STYXQ8WUJ0 223 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 RMDN2Q96LZ7 410 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 GPR87Q9BY21 358 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 COG4Q9H9E3 785 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 SYTL2Q9HCH5 934 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 LATS2Q9NRM7 1088 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 C1GALT1Q9NS00 363 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 NLE1Q9NVX2 485 aaPredicted RBP12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 IMPACTQ9P2X3 320 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 POLHQ9Y253 713 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 BTRCQ9Y297 605 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 MRPS18BQ9Y676 258 aaKnown RBP12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 SETXQ7Z333 2677 aaKnown RBP12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 MYO18BQ8IUG5 2567 aa12.73□□□□□ -0.37
ATPAF2-207ENST00000488753 ZNF106Q9H2Y7 1883 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 OR6C74A6NCV1 312 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 ERI2A8K979 691 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 PYCARD-AS1I3L0S3 204 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 QSOX1O00391 747 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 IFRD1O00458 451 aaPredicted RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 DDX3YO15523 660 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 CPNE3O75131 537 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 KATNA1O75449 491 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 CREG1O75629 220 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 AP2A2O94973 939 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 TIAF1O95411 115 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 AP2A1O95782 977 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 POLBP06746 335 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 MSL3P1P0C860 447 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 EBLN1P0CF75 366 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 STIP1P31948 543 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 KPNA2P52292 529 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 TMPRSS15P98073 1019 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 CACNG1Q06432 222 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 ATP1A1-AS1Q5TC04 95 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 LINC00523Q86TU6 105 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 LILRA3Q8N6C8 439 aaPredicted RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 ZNF501Q96CX3 271 aaPredicted RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 ABHD17AQ96GS6 310 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 CDKN2AIPNLQ96HQ2 116 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 HES6Q96HZ4 224 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 LRFN5Q96NI6 719 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 FRMD8P1Q9BZ68 369 aaPredicted RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 TRIM4Q9C037 500 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 OR52A5Q9H2C5 316 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 TFB2MQ9H5Q4 396 aaKnown RBP12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 FAM96AQ9H5X1 160 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 MVB12BQ9H7P6 319 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 KCND1Q9NSA2 647 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 POMT2Q9UKY4 750 aa12.72□□□□□ -0.37
ATPAF2-207ENST00000488753 MROH6A6NGR9 719 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 MKRN2OSH3BPM6 223 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 CCL22O00626 93 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 FTCDO95954 541 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 CASRP41180 1078 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 GDF10P55107 478 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 TLE1Q04724 770 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 ERV3-1Q14264 604 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 ITIH4Q14624 930 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 LACTB2Q53H82 288 aaPredicted RBP12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 ZRANB3Q5FWF4 1079 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 ZNF517Q6ZMY9 492 aaPredicted RBP12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 SERPINA9Q86WD7 417 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 APLFQ8IW19 511 aaPredicted RBP12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 RNF10Q8N5U6 811 aaKnown RBP12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 OR4E2Q8NGC2 313 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 CT55Q8WUE5 264 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 NAT14Q8WUY8 206 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 LCN9Q8WX39 176 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 ALS2CR12Q96Q35 445 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 TMEM121Q9BTD3 319 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 SRMSQ9H3Y6 488 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 FANCEQ9HB96 536 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 FAM8A1Q9UBU6 413 aa12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 R3HDM2Q9Y2K5 976 aaKnown RBP12.71□□□□□ -0.37
ATPAF2-207ENST00000488753 PIPSLA2A3N6 862 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 LIN7AO14910 233 aaPredicted RBP12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 MAP3K7O43318 606 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 SCRG1O75711 98 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 NTRK1P04629 796 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 FURINP09958 794 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 TPH1P17752 444 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 POLR2CP19387 275 aaPredicted RBP12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 PTPN4P29074 926 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 CDC25BP30305 580 aa12.7□□□□□ -0.38
ATPAF2-207ENST00000488753 NSG1P42857 185 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms