RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CCDC13Q8IYE1 715 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 BBS5Q8N3I7 341 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 TEX26Q8N6G2 289 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 CNTD1Q8N815 330 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 LINC00482Q8N8I6 264 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 ARL10Q8N8L6 244 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 FAM46DQ8NEK8 389 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 MAML1Q92585 1016 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 ZBTB8AQ96BR9 441 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 FAF2Q96CS3 445 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 RNF31Q96EP0 1072 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 DTD2Q96FN9 168 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 CCDC42Q96M95 316 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 RNF157Q96PX1 679 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 ZNF670Q9BS34 389 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 TDRD1Q9BXT4 1180 aaKnown RBP5.87□□□□□ -1.47
CDHR3-213ENST00000488386 TRIM5Q9C035 493 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 POLR1EQ9GZS1 481 aaKnown RBP5.87□□□□□ -1.47
CDHR3-213ENST00000488386 DPEP2Q9H4A9 486 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 WDR26Q9H7D7 661 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 SPATS2LQ9NUQ6 558 aaKnown RBP5.87□□□□□ -1.47
CDHR3-213ENST00000488386 ZNHIT6Q9NWK9 470 aaKnown RBP5.87□□□□□ -1.47
CDHR3-213ENST00000488386 RCOR3Q9P2K3 495 aaPredicted RBP5.87□□□□□ -1.47
CDHR3-213ENST00000488386 PHTF1Q9UMS5 762 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 SUFUQ9UMX1 484 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 ENTPD2Q9Y5L3 495 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 CSNK1G3Q9Y6M4 447 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 RNF215Q9Y6U7 377 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 ARHGEF17Q96PE2 2063 aaPredicted RBP5.87□□□□□ -1.47
CDHR3-213ENST00000488386 APC2O95996 2303 aa5.87□□□□□ -1.47
CDHR3-213ENST00000488386 KNTC1P50748 2209 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 A0A0J9YYE9 177 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 A0A0U1RQJ8 604 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 PRSS38A1L453 326 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TPP1O14773 563 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 APOL1O14791 398 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 MATN3O15232 486 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 NOBOXO60393 691 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 SOCS5O75159 536 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 EML2O95834 649 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 MT-CYBP00156 380 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TRBC1P01850 177 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 ATP1A1P05023 1023 aaKnown RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 GP1BAP07359 652 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 KRT7P08729 469 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TPM1P09493 284 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 MYCLP1P12525 358 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 CCNB1P14635 433 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 PECAM1P16284 738 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 CCNCP24863 283 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 MAN1A1P33908 653 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TRIM23P36406 574 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 HSPA9P38646 679 aaKnown RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 MAGEA1P43355 309 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 ABCG1P45844 678 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 GPR1P46091 355 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 PEX5P50542 639 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 EPHB1P54762 984 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 POLR2LP62875 67 aaKnown RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TRIM14Q14142 442 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 SPIDRQ14159 915 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 PDK2Q15119 407 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TBC1D25Q3MII6 688 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 AMZ1Q400G9 498 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 SOWAHCQ53LP3 525 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 PHF19Q5T6S3 580 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 NKAIN2Q5VXU1 208 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 ALS2CLQ60I27 953 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TIGD7Q6NT04 549 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 AADACL2Q6P093 401 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 RBM44Q6ZP01 1051 aaKnown RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 USP45Q70EL2 814 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TECPR1Q7Z6L1 1165 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 GKN2Q86XP6 184 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TRIM48Q8IWZ4 208 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 CBARPQ8N350 705 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 FSTL5Q8N475 847 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TC2NQ8N9U0 490 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 SPATA22Q8NHS9 363 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 KRT35Q92764 455 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 NINJ1Q92982 152 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 AP2M1Q96CW1 435 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 EID2BQ96D98 161 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 HDAC11Q96DB2 347 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 IQCDQ96DY2 449 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 SCRN2Q96FV2 425 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 PRR11Q96HE9 360 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 AGAP3Q96P47 875 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 WDR24Q96S15 920 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 RBM15Q96T37 977 aaKnown RBP eCLIP5.86□□□□□ -1.478e-9■■□□□ 12
CDHR3-213ENST00000488386 FAM118BQ9BPY3 351 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 HERPUD2Q9BSE4 406 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 RIOK2Q9BVS4 552 aaKnown RBP5.86□□□□□ -1.47
CDHR3-213ENST00000488386 PCDH9Q9HC56 1237 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 CPNE5Q9HCH3 593 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 EPB41L5Q9HCM4 733 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 SAMD15Q9P1V8 674 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 DKK4Q9UBT3 224 aa5.86□□□□□ -1.47
CDHR3-213ENST00000488386 SHOC2Q9UQ13 582 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms