RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 PEX11BO96011 259 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 TPOP07202 933 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 RALAP11233 206 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 MYCLP12524 364 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 GNSP15586 552 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 S100PP25815 95 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 ELK4P28324 431 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 HOXC12P31275 282 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 TFAMQ00059 246 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 ALCAMQ13740 583 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 IER5Q5VY09 327 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 ELP2Q6IA86 826 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 PYHIN1Q6K0P9 492 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 NOTUMQ6P988 496 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 RTL4Q6ZR62 310 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 HIPK1Q86Z02 1210 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 ZNF781Q8N8C0 355 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 DNAAF3Q8N9W5 541 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 NANPQ8TBE9 248 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 MFSD14AQ96MC6 490 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 ZSWIM3Q96MP5 696 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 LENG8Q96PV6 779 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 HSD17B14Q9BPX1 270 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 CBWD1Q9BRT8 395 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 C1orf112Q9NSG2 853 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 TMLHEQ9NVH6 421 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 GPN3Q9UHW5 284 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 ZNF112Q9UJU3 913 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 PURGQ9UJV8 347 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 SNX6Q9UNH7 406 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SNED1Q8TER0 1413 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 OR6C70A6NIJ9 312 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 CLDN4O14493 209 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 ULK1O75385 1050 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 CDC123O75794 336 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 ADH1CP00326 375 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 ALDH1A1P00352 501 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 FGF3P11487 239 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 PDGFRAP16234 1089 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 STMN1P16949 149 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 GLRA2P23416 452 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 TM4SF1P30408 202 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 PSMD4P55036 377 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 SP4Q02446 784 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 PPP3CAQ08209 521 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 HYAL2Q12891 473 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SGCGQ13326 291 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 PUM1Q14671 1186 aaKnown RBP eCLIP6.26□□□□□ -1.41
SIK3-212ENST00000488337 POLD3Q15054 466 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 CHI3L2Q15782 390 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 COLEC12Q5KU26 742 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 STXBP5Q5T5C0 1151 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 EPGNQ6UW88 154 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 BTN2A1Q7KYR7 527 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 OTOP1Q7RTM1 612 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 PAGE2Q7Z2X7 111 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 RAB43Q86YS6 212 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 OFCC1Q8IZS5 231 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 CLEC4FQ8N1N0 589 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 GPR156Q8NFN8 814 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 KBTBD8Q8NFY9 601 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 KCNA7Q96RP8 456 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 KLF6Q99612 283 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 MRPL47Q9HD33 250 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 DDX4Q9NQI0 724 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 RAB20Q9NX57 234 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 HSPBP1Q9NZL4 362 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 MARCOQ9UEW3 520 aaPredicted RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 MED16Q9Y2X0 877 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 TRPV2Q9Y5S1 764 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 COL24A1Q17RW2 1714 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 DOT1LQ8TEK3 1739 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 A6NCN8 305 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 NRP1O14786 923 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SLC31A2O15432 143 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 NDUFB10O96000 172 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 DPEP1P16444 411 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SPI1P17947 270 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 KCNA5P22460 613 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SHMT2P34897 504 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 TGFBR2P37173 567 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 PREPP48147 710 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 TKTL1P51854 596 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 CLN3Q13286 438 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SLC14A2Q15849 920 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 XKR3Q5GH77 459 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SHQ1Q6PI26 577 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 TMEM179Q6ZVK1 233 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 FAM183BPQ6ZVS7 135 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 EFL1Q7Z2Z2 1120 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 RHOT1Q8IXI2 618 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 FBXL13Q8NEE6 735 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 RILPQ96NA2 401 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 CSPG4P5Q96PW8 444 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 SH2D3AQ9BRG2 576 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 POLR1EQ9GZS1 481 aaKnown RBP6.26□□□□□ -1.41
SIK3-212ENST00000488337 TOR3AQ9H497 397 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 RNPEPQ9H4A4 650 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 ZNF69Q9UC07 566 aa6.26□□□□□ -1.41
SIK3-212ENST00000488337 NDRG3Q9UGV2 375 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms