RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 CTBSQ01459 385 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 SF3A3Q12874 501 aaKnown RBP eCLIP16.54■□□□□ 0.24
NF1-211ENST00000487476 MPP2Q14168 576 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 GBX1Q14549 363 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 SNCBQ16143 134 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 TAF1BQ53T94 588 aaPredicted RBP16.54■□□□□ 0.24
NF1-211ENST00000487476 C16orf46Q6P387 395 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 PIGWQ7Z7B1 504 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 CLEC14AQ86T13 490 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 DCP2Q8IU60 420 aaKnown RBP16.54■□□□□ 0.24
NF1-211ENST00000487476 OXR1Q8N573 874 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 ANKS4BQ8N8V4 417 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 SMC6Q96SB8 1091 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 CCDC134Q9H6E4 229 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 COG4Q9H9E3 785 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 POPDC3Q9HBV1 291 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 SNX11Q9Y5W9 270 aa16.54■□□□□ 0.24
NF1-211ENST00000487476 A0A087X1B8 175 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 TNFP01375 233 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 BRAFP15056 766 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 IL2P60568 153 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 C1orf61Q13536 156 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 SEPT7Q16181 437 aaKnown RBP16.53■□□□□ 0.24
NF1-211ENST00000487476 SYTL3Q4VX76 610 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 TBC1D1Q86TI0 1168 aaPredicted RBP16.53■□□□□ 0.24
NF1-211ENST00000487476 SPDYE1Q8NFV5 336 aaPredicted RBP16.53■□□□□ 0.24
NF1-211ENST00000487476 ASZ1Q8WWH4 475 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 GPR78Q96P69 363 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 STMN4Q9H169 189 aaPredicted RBP16.53■□□□□ 0.24
NF1-211ENST00000487476 OSGEPL1Q9H4B0 414 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 SMOC1Q9H4F8 434 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.53■□□□□ 0.24
NF1-211ENST00000487476 PSMD13Q9UNM6 376 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 C17orf113A0A1B0GUU1 675 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 F8W8V4 182 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 APOA4P06727 396 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 JUNDP17535 347 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 PLEKHS1Q5SXH7 462 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 CYHR1Q6ZMK1 362 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 TAX1BP1Q86VP1 789 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 NRROSQ86YC3 692 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 PHACTR4Q8IZ21 702 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 HM13Q8TCT9 377 aa16.53■□□□□ 0.24
NF1-211ENST00000487476 DNMT3AQ9Y6K1 912 aaPredicted RBP16.53■□□□□ 0.24
NF1-211ENST00000487476 COPEO14579 308 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 ZBTB14O43829 449 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 TYROBPO43914 113 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 SLCO2B1O94956 709 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 CSF2P04141 144 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 CFIP05156 583 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 TEAD4Q15561 434 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 PEAR1Q5VY43 1037 aaPredicted RBP16.52■□□□□ 0.24
NF1-211ENST00000487476 METRNLQ641Q3 311 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 SLC30A9Q6PML9 568 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 TMEM159Q96B96 161 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 TIMM29Q9BSF4 260 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 SYTL2Q9HCH5 934 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 KCNK9Q9NPC2 374 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 TMEM216Q9P0N5 145 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 SENP1Q9P0U3 644 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 KLHL42Q9P2K6 505 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 SLC17A7Q9P2U7 560 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 WDR37Q9Y2I8 494 aa16.52■□□□□ 0.24
NF1-211ENST00000487476 TNRC6BQ9UPQ9 1833 aaKnown RBP16.52■□□□□ 0.23
NF1-211ENST00000487476 PRR19A6NJB7 356 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 PRR5-ARHGAP8B1AHC4 643 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 CDC7O00311 574 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 KLHL2O95198 593 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 EML2O95834 649 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 LTA4HP09960 611 aaKnown RBP16.52■□□□□ 0.23
NF1-211ENST00000487476 CD1DP15813 335 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 DGKAP23743 735 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 RPA3P35244 121 aaPredicted RBP16.52■□□□□ 0.23
NF1-211ENST00000487476 CTSKP43235 329 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 KCNC1P48547 511 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 TTLL9Q3SXZ7 439 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 PRRT3Q5FWE3 981 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 SKA2Q8WVK7 121 aaPredicted RBP16.52■□□□□ 0.23
NF1-211ENST00000487476 PTERQ96BW5 349 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 APOPT1Q96IL0 206 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 MYCBPQ99417 103 aaPredicted RBP16.52■□□□□ 0.23
NF1-211ENST00000487476 ARRDC1-AS1Q9H2J1 176 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 GEMIN8Q9NWZ8 242 aaKnown RBP16.52■□□□□ 0.23
NF1-211ENST00000487476 APOBEC3BQ9UH17 382 aaKnown RBP16.52■□□□□ 0.23
NF1-211ENST00000487476 SLC12A4Q9UP95 1085 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 ACTL7BQ9Y614 415 aa16.52■□□□□ 0.23
NF1-211ENST00000487476 LIN7AO14910 233 aaPredicted RBP16.51■□□□□ 0.23
NF1-211ENST00000487476 KPNA5O15131 536 aa16.51■□□□□ 0.23
NF1-211ENST00000487476 SNX2O60749 519 aa16.51■□□□□ 0.23
NF1-211ENST00000487476 VIMP08670 466 aaKnown RBP16.51■□□□□ 0.23
NF1-211ENST00000487476 NME1P15531 152 aaKnown RBP16.51■□□□□ 0.23
NF1-211ENST00000487476 CRHR1P34998 444 aa16.51■□□□□ 0.23
NF1-211ENST00000487476 ABRQ12979 859 aa16.51■□□□□ 0.23
NF1-211ENST00000487476 NKAPQ8N5F7 415 aaKnown RBP16.51■□□□□ 0.23
NF1-211ENST00000487476 ELAC2Q9BQ52 826 aaKnown RBP16.51■□□□□ 0.23
NF1-211ENST00000487476 LRRC61Q9BV99 259 aa16.51■□□□□ 0.23
NF1-211ENST00000487476 OR52A5Q9H2C5 316 aa16.51■□□□□ 0.23
NF1-211ENST00000487476 TRNAU1APQ9NX07 287 aaKnown RBP16.51■□□□□ 0.23
NF1-211ENST00000487476 TBC1D29Q9UFV1 150 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms