RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 MSX1P28360 303 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 KRT9P35527 623 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 PAPOLAP51003 745 aaKnown RBP11.31□□□□□ -0.6
TRIM56-204ENST00000487252 STC1P52823 247 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 TRAF2Q12933 501 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 C15orf59Q2T9L4 293 aaPredicted RBP11.31□□□□□ -0.6
TRIM56-204ENST00000487252 CCDC14Q49A88 953 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 HENMT1Q5T8I9 393 aaKnown RBP11.31□□□□□ -0.6
TRIM56-204ENST00000487252 MLIPQ5VWP3 458 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 LINC00696Q6ZRV3 163 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 STRADAQ7RTN6 431 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 CAMKMTQ7Z624 323 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 SPPL2CQ8IUH8 684 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 DNAAF3Q8N9W5 541 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 HAS2Q92819 552 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 CXorf40BQ96DE9 158 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 TIMM29Q9BSF4 260 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 DESI2Q9BSY9 194 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 PLCB1Q9NQ66 1216 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 DNAJB12Q9NXW2 375 aaKnown RBP11.31□□□□□ -0.6
TRIM56-204ENST00000487252 WDR37Q9Y2I8 494 aa11.31□□□□□ -0.6
TRIM56-204ENST00000487252 TMEM150CB9EJG8 249 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 H3BMH7 237 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 PMPCBO75439 489 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 CBSLP0DN79 551 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
TRIM56-204ENST00000487252 CBSP35520 551 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 SPAM1P38567 509 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 KPNA2P52292 529 aaKnown RBP11.3□□□□□ -0.6
TRIM56-204ENST00000487252 ZBED6P86452 979 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 SEPT7Q16181 437 aaKnown RBP11.3□□□□□ -0.6
TRIM56-204ENST00000487252 MAN2A1Q16706 1144 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 CDO1Q16878 200 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 IRAK1BP1Q5VVH5 260 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 ZNF662Q6ZS27 426 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 EMC1Q8N766 993 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 GPR150Q8NGU9 434 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 SDCCAG3Q96C92 435 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 PPM1MQ96MI6 270 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 CEP63Q96MT8 703 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 SLC39A8Q9C0K1 460 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 PLEKHA6Q9Y2H5 1048 aa11.3□□□□□ -0.6
TRIM56-204ENST00000487252 LUC7L2Q9Y383 392 aaKnown RBP11.3□□□□□ -0.6
TRIM56-204ENST00000487252 E9PLN8 166 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 FGF10O15520 208 aaPredicted RBP11.29□□□□□ -0.6
TRIM56-204ENST00000487252 FZD6O60353 706 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 MTA2O94776 668 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 TOXO94900 526 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 ZWINTO95229 277 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 RASAL1O95294 804 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 CTPS1P17812 591 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 CASQ1P31415 396 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 SOX11P35716 441 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 ARHGAP25P42331 645 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 PTPN9P43378 593 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 MTIF2P46199 727 aaKnown RBP11.29□□□□□ -0.6
TRIM56-204ENST00000487252 RENBPP51606 427 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 DRG2P55039 364 aaKnown RBP11.29□□□□□ -0.6
TRIM56-204ENST00000487252 GNG11P61952 73 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 ARG2P78540 354 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 CACNG1Q06432 222 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 DMPKQ09013 629 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 VWA3BQ502W6 1294 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 C2CD6Q53TS8 623 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 RHBDD2Q6NTF9 364 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 FBXO38Q6PIJ6 1188 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 WDR59Q6PJI9 974 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 KIRREL2Q6UWL6 708 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 ZNF547Q8IVP9 402 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 C3orf20Q8ND61 904 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 TEKT4Q8WW24 435 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 SMIM14Q96QK8 99 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 NUDCD1Q96RS6 583 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 TSG101Q99816 390 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 VKORC1Q9BQB6 163 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 NOD2Q9HC29 1040 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 SLC24A3Q9HC58 644 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 C1GALT1Q9NS00 363 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 HRASLS2Q9NWW9 162 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 SOHLH2Q9NX45 425 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 MYO1AQ9UBC5 1043 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 SERTAD3Q9UJW9 196 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 REXO2Q9Y3B8 237 aaKnown RBP11.29□□□□□ -0.6
TRIM56-204ENST00000487252 CPAMD8Q8IZJ3 1885 aa11.29□□□□□ -0.6
TRIM56-204ENST00000487252 ARHGAP42A6NI28 874 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 C2CD4BA6NLJ0 364 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 RNF212BA8MTL3 300 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 E7EQ34 232 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 GOLGA8SH3BPF8 625 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 KMOO15229 486 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 DDX3YO15523 660 aaKnown RBP11.28□□□□□ -0.6
TRIM56-204ENST00000487252 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
TRIM56-204ENST00000487252 IDSP22304 550 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 IL10RBQ08334 325 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 SLC10A7Q0GE19 358 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 INSCQ1MX18 579 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 FKBP15Q5T1M5 1219 aa11.28□□□□□ -0.6
TRIM56-204ENST00000487252 ZFYVE27Q5T4F4 411 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms