RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 RPS6KL1Q9Y6S9 549 aa18.61■□□□□ 0.57
CLIP2-206ENST00000487091 TLN1Q9Y490 2541 aaKnown RBP18.6■□□□□ 0.57
CLIP2-206ENST00000487091 UBA6A0AVT1 1052 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-206ENST00000487091 OR6C74A6NCV1 312 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 NKX2-8O15522 239 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 KIAA0754O94854 1291 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 GAS8O95995 478 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 CD151P48509 253 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 ITIH4Q14624 930 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 RPS6KA1Q15418 735 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 DBN1Q16643 649 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 TAB3Q8N5C8 712 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-206ENST00000487091 DNAAF3Q8N9W5 541 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 ACVR1CQ8NER5 493 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 OR52K1Q8NGK4 314 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 OR52A5Q9H2C5 316 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 IL17BQ9UHF5 180 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 RARRES3Q9UL19 164 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 RIMKLBQ9ULI2 386 aa18.6■□□□□ 0.57
CLIP2-206ENST00000487091 BOD1L1Q8NFC6 3051 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 HEATR9A2RTY3 570 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 QSOX1O00391 747 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 IFRD1O00458 451 aaPredicted RBP18.59■□□□□ 0.57
CLIP2-206ENST00000487091 IFNB1P01574 187 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 MT-ND3P03897 115 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 PRSS56P0CW18 603 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 FOLR1P15328 257 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 MSNP26038 577 aaKnown RBP18.59■□□□□ 0.57
CLIP2-206ENST00000487091 NSG1P42857 185 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 ARL4DP49703 201 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 HSD11B2P80365 405 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 CDC20Q12834 499 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 NFATC3Q12968 1075 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 TUBB3Q13509 450 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 D2HGDHQ8N465 521 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 CLDN19Q8N6F1 224 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 GALNT6Q8NCL4 622 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 C1orf54Q8WWF1 131 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 STARD8Q92502 1023 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 STAMBPL1Q96FJ0 436 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 ELMO2Q96JJ3 720 aa18.59■□□□□ 0.57
CLIP2-206ENST00000487091 E7EVH7 732 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 J3QKU1 62 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 MATN2O00339 956 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 ZBTB11O95625 1053 aaPredicted RBP18.58■□□□□ 0.56
CLIP2-206ENST00000487091 CCNYL3P0C7X3 344 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 FOXN2P32314 431 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 CCR10P46092 362 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 LMAN1P49257 510 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 PRKAA1Q13131 559 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 SEMA5AQ13591 1074 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 CCNG2Q16589 344 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 LYPLAL1Q5VWZ2 237 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 PACS1Q6VY07 963 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 PPP1R21Q6ZMI0 780 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 MICALCLQ6ZW33 695 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 OR4E2Q8NGC2 313 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 FERD3LQ96RJ6 166 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 RANBP9Q96S59 729 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 MVB12BQ9H7P6 319 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 FGF21Q9NSA1 209 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 SMARCAL1Q9NZC9 954 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 PAK5Q9P286 719 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 LNPEPQ9UIQ6 1025 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 TUBD1Q9UJT1 453 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 CROTQ9UKG9 612 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 PADI1Q9ULC6 663 aa18.58■□□□□ 0.56
CLIP2-206ENST00000487091 CCDC162PA2VCL2 907 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 TERTO14746 1132 aaKnown RBP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 LIN7AO14910 233 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 POLR2CP19387 275 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 TCN2P20062 427 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 F8A1P23610 371 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 ADRA1DP25100 572 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 PDHA2P29803 388 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 DLSTP36957 453 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 KPNA2P52292 529 aaKnown RBP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 SNX1Q13596 522 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 KCNAB1Q14722 419 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 CCDC38Q502W7 563 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 TSTD2Q5T7W7 516 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 PWWP2BQ6NUJ5 590 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 DRICH1Q6PGQ1 229 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 OR13J1Q8NGT2 312 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 OR8K5Q8NH50 307 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 LCN9Q8WX39 176 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 TFGQ92734 400 aaPredicted RBP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 FAM117AQ9C073 453 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 SLC25A18Q9H1K4 315 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 SRMSQ9H3Y6 488 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 TFB2MQ9H5Q4 396 aaKnown RBP18.57■□□□□ 0.56
CLIP2-206ENST00000487091 CASS4Q9NQ75 786 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 RAB6BQ9NRW1 208 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 C1GALT1Q9NS00 363 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 KCND3Q9UK17 655 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 BTRCQ9Y297 605 aa18.57■□□□□ 0.56
CLIP2-206ENST00000487091 CCDC78A2IDD5 438 aa18.56■□□□□ 0.56
CLIP2-206ENST00000487091 TIAF1O95411 115 aa18.56■□□□□ 0.56
CLIP2-206ENST00000487091 FTH1P02794 183 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms