RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TMEM159Q96B96 161 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 ERLEC1Q96DZ1 483 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 MOCOSQ96EN8 888 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 NSL1Q96IY1 281 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 HIC2Q96JB3 615 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 FOPNLQ96NB1 174 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 HGH1Q9BTY7 390 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 C1QTNF7Q9BXJ2 289 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 SHCBP1LQ9BZQ2 653 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 TRIM39Q9HCM9 518 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 MID1IP1Q9NPA3 183 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 ACSS2Q9NR19 701 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 FBXL12Q9NXK8 326 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 WWOXQ9NZC7 414 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 TSR3Q9UJK0 312 aaKnown RBP6.92□□□□□ -1.3
SF3A3-206ENST00000487062 PCTPQ9UKL6 214 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 IKZF3Q9UKT9 509 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 FZD4Q9ULV1 537 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 GPR34Q9UPC5 381 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 TRAF6Q9Y4K3 522 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 ANGPTL3Q9Y5C1 460 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 ATG2BQ96BY7 2078 aa6.92□□□□□ -1.3
SF3A3-206ENST00000487062 MYO10Q9HD67 2058 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 C17orf113A0A1B0GUU1 675 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ANTXRLA6NF34 631 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 IGLON5A6NGN9 336 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 GPR89AB7ZAQ6 455 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ANKRD65E5RJM6 399 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ARHGAP33O14559 1287 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 LIN7AO14910 233 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 AZIN1O14977 448 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 PLRG1O43660 514 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SGTAO43765 313 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 GPC4O75487 556 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SOD1P00441 154 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 CATP04040 527 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 GPR89BP0CG08 455 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ESRRAP11474 423 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 EZRP15311 586 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NCF2P19878 526 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 CALB2P22676 271 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 MAP4P27816 1152 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 MAPK1P28482 360 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ADSLP30566 484 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 RPIAP49247 311 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 MNAT1P51948 309 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 HK3P52790 923 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 CDH13P55290 713 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 AP1S2P56377 157 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 TAS2R38P59533 333 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NCALDP61601 193 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SGCGQ13326 291 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 TUBB3Q13509 450 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 TDGQ13569 410 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SMAD2Q15796 467 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 PDCD2Q16342 344 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 KHDC1Q4VXA5 237 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SLC9B1Q4ZJI4 515 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SLC44A4Q53GD3 710 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NXNQ6DKJ4 435 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 PNCKQ6P2M8 343 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NEK5Q6P3R8 708 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 USP30Q70CQ3 517 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 RPS27LQ71UM5 84 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 MAVSQ7Z434 540 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ADGRG6Q86SQ4 1221 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 CACUL1Q86Y37 369 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 TRAPPC5Q8IUR0 188 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 OR14C36Q8NHC7 312 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 MCOLN3Q8TDD5 553 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 TRPC4APQ8TEL6 797 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 UBTD2Q8WUN7 234 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NAT14Q8WUY8 206 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ATP6V1E2Q96A05 226 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 FAM131CQ96AQ9 280 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 KLHL29Q96CT2 875 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SIPA1Q96FS4 1042 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SLC12A9Q9BXP2 914 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NUSAP1Q9BXS6 441 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NUF2Q9BZD4 464 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 NMUR2Q9GZQ4 415 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 OR2AG1Q9H205 316 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 PARVBQ9HBI1 364 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 PREBQ9HCU5 417 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SEMA4BQ9NPR2 832 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 SLC2A4RGQ9NR83 387 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 PHPT1Q9NRX4 125 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 EVA1BQ9NVM1 165 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 UTP6Q9NYH9 597 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 OPTCQ9UBM4 332 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 LNPEPQ9UIQ6 1025 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 PTBP2Q9UKA9 531 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ADAMTS6Q9UKP5 1117 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 CNOT6Q9ULM6 557 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 MMP17Q9ULZ9 603 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 FIS1Q9Y3D6 152 aa6.91□□□□□ -1.3
SF3A3-206ENST00000487062 DNMT3AQ9Y6K1 912 aaPredicted RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 ZFC3H1O60293 1989 aaKnown RBP6.91□□□□□ -1.3
SF3A3-206ENST00000487062 TBC1D3DA0A087WVF3 549 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms