RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PROSER1Q86XN7 944 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 NXPE1Q8N323 547 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 OR2AP1Q8NGE2 309 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 FIBINQ8TAL6 211 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 UBTD2Q8WUN7 234 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 MRPS31Q92665 395 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 PPP3R2Q96LZ3 170 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 LYSMD1Q96S90 227 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 EGFL8Q99944 293 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 APOL5Q9BWW9 433 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 CD244Q9BZW8 370 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 RC3H2Q9HBD1 1191 aaKnown RBP17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 C8orf4Q9NR00 106 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 WWOXQ9NZC7 414 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 ANAPC2Q9UJX6 822 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 SH3BP1Q9Y3L3 701 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 POLR3HQ9Y535 204 aaPredicted RBP17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 ANGPTL3Q9Y5C1 460 aa17.67■□□□□ 0.42
PDLIM7-207ENST00000486828 DLGAP1O14490 977 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 TEX28O15482 410 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 CKMP06732 381 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 JAK1P23458 1154 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 CD70P32970 193 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 PTPN5P54829 565 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 SLC7A9P82251 487 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 PLOD1Q02809 727 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 LSAMPQ13449 338 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 LRRC26Q2I0M4 334 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 MYLK3Q32MK0 819 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 RFTN2Q52LD8 501 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 DGKKQ5KSL6 1271 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 FAM117BQ6P1L5 589 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 DLEU7Q6UYE1 221 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 GAREM2Q75VX8 874 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 SPRED1Q7Z699 444 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 UBE2Q1Q7Z7E8 422 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 TSPAN14Q8NG11 270 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 RHBDF1Q96CC6 855 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 HAUS8Q9BT25 410 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 RDH14Q9HBH5 336 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 OLAHQ9NV23 265 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 OPTCQ9UBM4 332 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 ZMYM5Q9UJ78 669 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 MYRFQ9Y2G1 1151 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 AGAP14A8MT82 685 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 H3BNH8 94 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 PLOD2O00469 737 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 SPATA31D3P0C874 917 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 RFC2P35250 354 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 CRY1Q16526 586 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 SMU1Q2TAY7 513 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 TMTC4Q5T4D3 741 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 METTL2BQ6P1Q9 378 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 SPATA31D4Q6ZUB0 917 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 TSPAN33Q86UF1 283 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 TBC1D21Q8IYX1 336 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 FIBCD1Q8N539 461 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 LATS2Q9NRM7 1088 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 INTS6Q9UL03 887 aaKnown RBP17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 DMTF1Q9Y222 760 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 ATP11BQ9Y2G3 1177 aa17.66■□□□□ 0.42
PDLIM7-207ENST00000486828 A0A1B0GTW7 788 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 NPIPB15A6NHN6 443 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 PDLIM1O00151 329 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 RGS14O43566 566 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 C7P10643 843 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 HRH2P25021 359 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 TTLL9Q3SXZ7 439 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 BORAQ6PGQ7 559 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 GPR26Q8NDV2 337 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 NMD3Q96D46 503 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 RMND5BQ96G75 393 aaPredicted RBP17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 SH3GL3Q99963 347 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 RPF2Q9H7B2 306 aaKnown RBP17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 USP22Q9UPT9 525 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 PCDHB3Q9Y5E6 796 aa17.65■□□□□ 0.42
PDLIM7-207ENST00000486828 A8MX80 341 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 K7EPI3 171 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 SLC28A1O00337 649 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 ACOX3O15254 700 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 RSL1D1O76021 490 aaKnown RBP17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 WDR47O94967 919 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 RASAL1O95294 804 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 SLC2A4P14672 509 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 VARSP26640 1264 aaKnown RBP17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 GDF5P43026 501 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 OR4D2P58180 307 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 SNRPD1P62314 119 aaKnown RBP17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 MAD2L1Q13257 205 aaPredicted RBP17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 DYNC1I2Q13409 638 aaKnown RBP17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 PWP1Q13610 501 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 KIAA0040Q15053 153 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 CRTC1Q6UUV9 634 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 TPRG1Q6ZUI0 275 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 TMC8Q8IU68 726 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 ZFP28Q8NHY6 868 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 VOPP1Q96AW1 172 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 BIRC7Q96CA5 298 aa17.64■□□□□ 0.42
PDLIM7-207ENST00000486828 CGREF1Q99674 301 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms