RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 DUSP7Q16829 419 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 FAM214AQ32MH5 1076 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 RFX4Q33E94 735 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 TBRG1Q3YBR2 411 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 YIF1BQ5BJH7 314 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 XKR7Q5GH72 579 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 CELF3Q5SZQ8 465 aaKnown RBP10.48□□□□□ -0.73
CCDC171-208ENST00000486641 CAPN13Q6MZZ7 669 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-208ENST00000486641 DET1Q7L5Y6 550 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 VN1R5Q7Z5H4 357 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 NRARPQ7Z6K4 114 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 CHPFQ8IZ52 775 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 AMER2Q8N7J2 671 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 TRIM63Q969Q1 353 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 RNF170Q96K19 258 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 CCDC115Q96NT0 180 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 CITED4Q96RK1 184 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 GPR20Q99678 358 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 PRKD2Q9BZL6 878 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 VNN3Q9NY84 501 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 VAPAQ9P0L0 249 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 MARCH4Q9P2E8 410 aaPredicted RBP10.48□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF225Q9UK10 706 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 USP21Q9UK80 565 aa10.48□□□□□ -0.73
CCDC171-208ENST00000486641 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC171-208ENST00000486641 H3BQ06 376 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 CAPN5O15484 640 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 DFNA5O60443 496 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 PEX10O60683 326 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 SNX4O95219 450 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ARIH2O95376 493 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 GRK5P34947 590 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 AIF1P55008 147 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 BACE1P56817 501 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 PWP1Q13610 501 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 LRRC26Q2I0M4 334 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 SOWAHCQ53LP3 525 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 C6orf136Q5SQH8 315 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF549Q6P9A3 640 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 AHSA2Q719I0 299 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 SYVN1Q86TM6 617 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 HIPK1Q86Z02 1210 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 AADATQ8N5Z0 425 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 FNDC5Q8NAU1 212 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF548Q8NEK5 533 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 OR10Q1Q8NGQ4 319 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 OR6P1Q8NGX9 317 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 GRPEL2Q8TAA5 225 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 GIPC2Q8TF65 315 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 FAM162AQ96A26 154 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ATOH8Q96SQ7 321 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 TBCDQ9BTW9 1192 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 NFKBIZQ9BYH8 718 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 RPRD1BQ9NQG5 326 aaKnown RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 RGS18Q9NS28 235 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ERVK13-1Q9NX77 482 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 TAS2R9Q9NYW1 312 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 CDH9Q9ULB4 789 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 TBC1D24Q9ULP9 559 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 RNF6Q9Y252 685 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 GMPPBQ9Y5P6 360 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 A3GALT2U3KPV4 340 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 DICER1Q9UPY3 1922 aaKnown RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 COL1A2P08123 1366 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 PCM1Q15154 2024 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 A0A0X1KG70 313 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 YJEFN3A6XGL0 299 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ARNTLO00327 626 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 TEX28O15482 410 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 PAPSS2O95340 614 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 SERPINF2P08697 491 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 PTPRAP18433 802 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 CCNCP24863 283 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 DAPP51397 102 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ZNF135P52742 658 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 PON2Q15165 354 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 NFE2Q16621 373 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 TYSND1Q2T9J0 566 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 LRRC8DQ7L1W4 858 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 CTU1Q7Z7A3 348 aaKnown RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 FAM126BQ8IXS8 530 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 TP53I13Q8NBR0 393 aaPredicted RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 C8orf37Q96NL8 207 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 DHRS9Q9BPW9 319 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 THUMPD3Q9BV44 507 aaKnown RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 DUSP16Q9BY84 665 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 TKTL2Q9H0I9 626 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 IKZF5Q9H5V7 419 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 ZFP14Q9HCL3 533 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 RASSF1Q9NS23 344 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 DDIT4Q9NX09 232 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 GJD2Q9UKL4 321 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 MKLN1Q9UL63 735 aa10.47□□□□□ -0.73
CCDC171-208ENST00000486641 MRPL42Q9Y6G3 142 aaKnown RBP10.47□□□□□ -0.73
CCDC171-208ENST00000486641 KRT87PA6NCN2 255 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 CXCR6O00574 342 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 SLC7A4O43246 635 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 HLA-DQB2P05538 268 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 CYP2A7P20853 494 aa10.46□□□□□ -0.73
CCDC171-208ENST00000486641 FDXRP22570 491 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms