RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CIR1Q86X95 450 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 PTRH1Q86Y79 214 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CTAGE4Q8IX94 777 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 PHACTR4Q8IZ21 702 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 FAM71DQ8N9W8 422 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 FBXO15Q8NCQ5 510 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 OR2A12Q8NGT7 310 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 KRT35Q92764 455 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 NCLNQ969V3 563 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 TMEM159Q96B96 161 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 HS6ST2Q96MM7 605 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 C7orf26Q96N11 449 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 LENG8Q96PV6 779 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 NUDCD1Q96RS6 583 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 PRMT1Q99873 361 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 ACPTQ9BZG2 426 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 INTS2Q9H0H0 1204 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 SERHL2Q9H4I8 314 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 THAP9Q9H5L6 903 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 RRAGDQ9NQL2 400 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 GLRX2Q9NS18 164 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 SPATS2LQ9NUQ6 558 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 GULP1Q9UBP9 304 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 UBA2Q9UBT2 640 aaPredicted RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 PISDQ9UG56 409 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 APOBEC3BQ9UH17 382 aaKnown RBP6.76□□□□□ -1.33
HDAC3-209ENST00000486618 IL36AQ9UHA7 158 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 RPS6KA6Q9UK32 745 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 TBC1D30Q9Y2I9 924 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 ATP6V1DQ9Y5K8 247 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 OR51B4Q9Y5P0 310 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 SCN8AQ9UQD0 1980 aa6.76□□□□□ -1.33
HDAC3-209ENST00000486618 CACNA1DQ01668 2161 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 COL12A1Q99715 3063 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 A0A1W2PPL8 197 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 A0A1W2PQ27 194 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 A0A1W2PQ64 194 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 A0A1W2PQC6 194 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 PRAMEF27A3QJZ7 478 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 GOLGA6L4A6NEF3 574 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 D6RAR5 112 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 PSMD9O00233 223 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 AP3D1O14617 1153 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 YY2O15391 372 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 DAPK3O43293 454 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 SULT1B1O43704 296 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 IGLV3-25P01717 112 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 RHOCP08134 193 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 QDPRP09417 244 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ALPIP09923 528 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ADRB3P13945 408 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ITIH2P19823 946 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 EEF1GP26641 437 aaKnown RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CCKBRP32239 447 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CD96P40200 585 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 GPD2P43304 727 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 PDX1P52945 283 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 PLTPP55058 493 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 HADHBP55084 474 aaKnown RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CDH4P55283 916 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 PFN3P60673 137 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 YPEL5P62699 121 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 C1orf61Q13536 156 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 SEMA5AQ13591 1074 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 DRAP1Q14919 205 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ELOCQ15369 112 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 TAF5Q15542 800 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CBWD6Q4V339 395 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ZCWPW2Q504Y3 356 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 HSP90AA5PQ58FG0 334 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CBWD3Q5JTY5 395 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CBWD5Q5RIA9 395 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 IZUMO3Q5VZ72 239 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 C22orf39Q6P5X5 142 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 DARS2Q6PI48 645 aaKnown RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 RBFAQ8N0V3 343 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 FSTL5Q8N475 847 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ANKS4BQ8N8V4 417 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ZNF527Q8NB42 609 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 GOLM1Q8NBJ4 401 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CHST14Q8NCH0 376 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 OR2W6PQ8NHA6 318 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ZNF564Q8TBZ8 553 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 SMARCE1Q969G3 411 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 KIAA1191Q96A73 305 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 RAB7BQ96AH8 199 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ARHGEF26Q96DR7 871 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 THOC1Q96FV9 657 aaKnown RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 PLPPR2Q96GM1 343 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 VPS50Q96JG6 964 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 TXN2Q99757 166 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 TSG101Q99816 390 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 CITED2Q99967 270 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 HEPHQ9BQS7 1158 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 KRT84Q9NSB2 600 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 DDIT4Q9NX09 232 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 TAS2R3Q9NYW6 316 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 EMC3Q9P0I2 261 aa6.75□□□□□ -1.33
HDAC3-209ENST00000486618 AKAP7Q9P0M2 348 aaPredicted RBP6.75□□□□□ -1.33
HDAC3-209ENST00000486618 ACTR3BQ9P1U1 418 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms