RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 CLDN7O95471 211 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 PRLP01236 227 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 MT-ND3P03897 115 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 FGF3P11487 239 aaPredicted RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 NFKB1P19838 968 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 CSF2RBP32927 897 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 CD68P34810 354 aaPredicted RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 ITKQ08881 620 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 MGAT5Q09328 741 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 ZBTB17Q13105 803 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 MPP3Q13368 585 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 LAMB3Q13751 1172 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 SPARCL1Q14515 664 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 ZNF648Q5T619 568 aaPredicted RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 LRRC66Q68CR7 880 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 TIFABQ6ZNK6 161 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 RGS9BPQ6ZS82 235 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 CAPN12Q6ZSI9 719 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 BBS5Q8N3I7 341 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 TEX26Q8N6G2 289 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 GABPB2Q8TAK5 448 aaPredicted RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 ACMSDQ8TDX5 336 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 MZB1Q8WU39 189 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 CKAP2Q8WWK9 683 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 CCDC74BQ96LY2 380 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 MAGEB18Q96M61 343 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 TMEM74Q96NL1 305 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 AGAP3Q96P47 875 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 TRIM4Q9C037 500 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 STRADBQ9C0K7 418 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 SLC25A51Q9H1U9 297 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 MRM3Q9HC36 420 aaKnown RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 PPANQ9NQ55 473 aaKnown RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 PHPT1Q9NRX4 125 aaPredicted RBP9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 OCIAD1Q9NX40 245 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 MKS1Q9NXB0 559 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 NSMCE4AQ9NXX6 385 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 PCDHGA7Q9Y5G6 932 aa9.26□□□□□ -0.93
TMEM39A-208ENST00000486159 ZFC3H1O60293 1989 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 RHPN2P1A8MT19 583 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 A8MU76 341 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 J3QKU1 62 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 NVLO15381 856 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 NUDT21O43809 227 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 TYROBPO43914 113 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 SOCS5O75159 536 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 C1QAP02745 245 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 FAM87AP0C7U9 286 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 PNLIPP16233 465 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ITGB6P18564 788 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CES1P23141 567 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 MGAT1P26572 445 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 HADHAP40939 763 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ACTR1BP42025 376 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 GPR1P46091 355 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ACTR1AP61163 376 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 SLC18A2Q05940 514 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 NFATC3Q12968 1075 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CRYMQ14894 314 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CLCA4Q14CN2 919 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 SEPT7Q16181 437 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ARMC12Q5T9G4 340 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 GKAP1Q5VSY0 366 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 MARC1Q5VT66 337 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 TTC19Q6DKK2 380 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CASC4Q6P4E1 433 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ZNF438Q7Z4V0 828 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CPLX4Q7Z7G2 160 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 TMEM135Q86UB9 458 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 PIM3Q86V86 326 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 DTX1Q86Y01 620 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CTAGE3PQ8IX95 158 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 AGGF1Q8N302 714 aaeCLIP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CNTD1Q8N815 330 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 PPM1NQ8N819 430 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 DNAAF3Q8N9W5 541 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 OR6C4Q8NGE1 309 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ARRDC2Q8TBH0 407 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 DENND1AQ8TEH3 1009 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ZNF473Q8WTR7 871 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 AP2M1Q96CW1 435 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 EID2BQ96D98 161 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 CCDC97Q96F63 343 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 SCRN2Q96FV2 425 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 MED8Q96G25 268 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 WBP1Q96G27 269 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ZNF317Q96PQ6 595 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 MCCC1Q96RQ3 725 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 PLCD4Q9BRC7 762 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 MLPHQ9BV36 600 aaPredicted RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 RIOK2Q9BVS4 552 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 ARNT2Q9HBZ2 717 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 RBM22Q9NW64 420 aaKnown RBP eCLIP9.25□□□□□ -0.933e-7■■■■■ 34.1
TMEM39A-208ENST00000486159 CNOT6Q9ULM6 557 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 SOX13Q9UN79 622 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 SLC17A4Q9Y2C5 497 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 PPIL1Q9Y3C6 166 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 FAM169AQ9Y6X4 670 aa9.25□□□□□ -0.93
TMEM39A-208ENST00000486159 IGHV1OR21-1A0A087WYE8 117 aa9.24□□□□□ -0.93
TMEM39A-208ENST00000486159 A0A0J9YYE9 177 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms