RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 C17orf113A0A1B0GUU1 675 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 CPNE3O75131 537 aaKnown RBP16.7■□□□□ 0.26
SMC4-216ENST00000485645 POLR2CP19387 275 aaPredicted RBP16.7■□□□□ 0.26
SMC4-216ENST00000485645 ARCN1P48444 511 aaKnown RBP16.7■□□□□ 0.26
SMC4-216ENST00000485645 KPNA2P52292 529 aaKnown RBP16.7■□□□□ 0.26
SMC4-216ENST00000485645 GPR33Q49SQ1 333 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 TCTN3Q6NUS6 607 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 AADACL2Q6P093 401 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 FAM199XQ6PEV8 388 aaPredicted RBP16.7■□□□□ 0.26
SMC4-216ENST00000485645 TMEM135Q86UB9 458 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 TMEM126BQ8IUX1 230 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 OR4E2Q8NGC2 313 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 OR8K5Q8NH50 307 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 SEC14L1Q92503 715 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 ALG3Q92685 438 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 GPR87Q9BY21 358 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 ACTL8Q9H568 366 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 AKIRIN1Q9H9L7 192 aaPredicted RBP16.7■□□□□ 0.26
SMC4-216ENST00000485645 SOHLH2Q9NX45 425 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 MAN2B2Q9Y2E5 1009 aa16.7■□□□□ 0.26
SMC4-216ENST00000485645 GOLGA6L9A6NEM1 432 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 CCL22O00626 93 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 LDB2O43679 373 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 RFPL1O75677 317 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 SCRG1O75711 98 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 PTMAP06454 111 aaKnown RBP16.69■□□□□ 0.26
SMC4-216ENST00000485645 PTPN4P29074 926 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 MC4RP32245 332 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 ZNF75DP51815 510 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 RPS15P62841 145 aaKnown RBP16.69■□□□□ 0.26
SMC4-216ENST00000485645 FOXK1P85037 733 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 KLRB1Q12918 225 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 GPR19Q15760 415 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 ARHGEF18Q6ZSZ5 1173 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 KLHDC8BQ8IXV7 354 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 TTC13Q8NBP0 860 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 ACVR1CQ8NER5 493 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 LCN9Q8WX39 176 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 ZNF501Q96CX3 271 aaPredicted RBP16.69■□□□□ 0.26
SMC4-216ENST00000485645 FERD3LQ96RJ6 166 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 LACRTQ9GZZ8 138 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 VPS37BQ9H9H4 285 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 ZDHHC3Q9NYG2 299 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 BTRCQ9Y297 605 aa16.69■□□□□ 0.26
SMC4-216ENST00000485645 REXO2Q9Y3B8 237 aaKnown RBP16.69■□□□□ 0.26
SMC4-216ENST00000485645 MATN2O00339 956 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 IFRD1O00458 451 aaPredicted RBP16.68■□□□□ 0.26
SMC4-216ENST00000485645 NR1D1P20393 614 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 CDH3P22223 829 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 VAV2P52735 878 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 PMS2P54278 862 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 IGFBP7Q16270 282 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 PARP6Q2NL67 630 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 ZRANB3Q5FWF4 1079 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 ZNF449Q6P9G9 518 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 FBXO38Q6PIJ6 1188 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 RAD9BQ6WBX8 426 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 APLFQ8IW19 511 aaPredicted RBP16.68■□□□□ 0.26
SMC4-216ENST00000485645 LRRC57Q8N9N7 239 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 TEX19Q8NA77 164 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 MR1Q95460 341 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 MRFAP1L1Q96HT8 127 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 DNAJC1Q96KC8 554 aaKnown RBP16.68■□□□□ 0.26
SMC4-216ENST00000485645 PPM1MQ96MI6 270 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 RUFY1Q96T51 708 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 SRMSQ9H3Y6 488 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 COG4Q9H9E3 785 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 FANCEQ9HB96 536 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 LATS2Q9NRM7 1088 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 C1GALT1Q9NS00 363 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 TLK1Q9UKI8 766 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 AMFRQ9UKV5 643 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 POMT2Q9UKY4 750 aa16.68■□□□□ 0.26
SMC4-216ENST00000485645 FARSAQ9Y285 508 aaKnown RBP16.68■□□□□ 0.26
SMC4-216ENST00000485645 IGLV3-16A0A075B6K0 115 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 TRBV5-4A0A0C4DH59 114 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 GSAPA4D1B5 854 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 GRID2IPA4D2P6 1211 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 SLC9B1P1A6NJY1 282 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 H7C0S8 307 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 K7EM74 188 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 KLK3P07288 261 aaPredicted RBP16.67■□□□□ 0.26
SMC4-216ENST00000485645 ACRV1P26436 265 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 CDKN1CP49918 316 aaPredicted RBP16.67■□□□□ 0.26
SMC4-216ENST00000485645 RPS18P62269 152 aaKnown RBP16.67■□□□□ 0.26
SMC4-216ENST00000485645 SEMA5AQ13591 1074 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 UGT8Q16880 541 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 KCTD11Q693B1 232 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 ASB18Q6ZVZ8 466 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 TAS2R42Q7RTR8 314 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 PEX26Q7Z412 305 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 SYVN1Q86TM6 617 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 SERPINA9Q86WD7 417 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 UBL4BQ8N7F7 174 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 FAM71DQ8N9W8 422 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 ACRBPQ8NEB7 543 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 THAP4Q8WY91 577 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 COL26A1Q96A83 441 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 TLR10Q9BXR5 811 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms