RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 EIF3EP60228 445 aaKnown RBP10.33□□□□□ -0.76
HMGN1-215ENST00000485550 TMPRSS15P98073 1019 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 XRCC4Q13426 336 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 ITGA9Q13797 1035 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 SPARCL1Q14515 664 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 LONRF2Q1L5Z9 754 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 PRR30Q53SZ7 412 aaPredicted RBP10.33□□□□□ -0.76
HMGN1-215ENST00000485550 ANKRD20A2Q5SQ80 823 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 ANKRD20A1Q5TYW2 823 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 ANKRD20A3Q5VUR7 823 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 C11orf63Q6NUN7 778 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 DUS1LQ6P1R4 473 aaKnown RBP10.33□□□□□ -0.76
HMGN1-215ENST00000485550 MICALCLQ6ZW33 695 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 PRSS42Q7Z5A4 293 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 LILRA3Q8N6C8 439 aaPredicted RBP10.33□□□□□ -0.76
HMGN1-215ENST00000485550 SIDT2Q8NBJ9 832 aaKnown RBP10.33□□□□□ -0.76
HMGN1-215ENST00000485550 DDHD1Q8NEL9 900 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 ACTL9Q8TC94 416 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 KLHL6Q8WZ60 621 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 STAMBPL1Q96FJ0 436 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 MAP3K3Q99759 626 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 TRIM55Q9BYV6 548 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 WWP1Q9H0M0 922 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 GBA3Q9H227 469 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 ASB8Q9H765 288 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.33□□□□□ -0.76
HMGN1-215ENST00000485550 LUZP4Q9P127 313 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
HMGN1-215ENST00000485550 UBA6A0AVT1 1052 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 C2orf81A6NN90 581 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 CCL22O00626 93 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 KCNN4O15554 427 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 ANXA9O76027 345 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 SRP72O76094 671 aaKnown RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 TIAF1O95411 115 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 EBLN1P0CF75 366 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 RBP3P10745 1247 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 NELFEP18615 380 aaKnown RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 FECHP22830 423 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 CTNNA1P35221 906 aaKnown RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 ARCN1P48444 511 aaKnown RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 ARL4DP49703 201 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 PMS2P54278 862 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 DMPKQ09013 629 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 IL11RAQ14626 422 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 TAF1AQ15573 450 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 C1QL3Q5VWW1 255 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 METRNLQ641Q3 311 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 ITPRIPL1Q6GPH6 555 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 FAM199XQ6PEV8 388 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 DARS2Q6PI48 645 aaKnown RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 FBXO38Q6PIJ6 1188 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 SARM1Q6SZW1 724 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 RANBP10Q6VN20 620 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 PPP1R3BQ86XI6 285 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 CCDC170Q8IYT3 715 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 OR13C4Q8NGS5 318 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 CCDC110Q8TBZ0 833 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 DTX3LQ8TDB6 740 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 TCTN2Q96GX1 697 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 C12orf66Q96MD2 445 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 OSBPL8Q9BZF1 889 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 TWSG1Q9GZX9 223 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 AKIRIN1Q9H9L7 192 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 HRASLS2Q9NWW9 162 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 MAP10Q9P2G4 905 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 EPHA6Q9UF33 1036 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 CRLS1Q9UJA2 301 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 ERRFI1Q9UJM3 462 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 PCDHA3Q9Y5H8 950 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 EPN1Q9Y6I3 576 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 DNMT3AQ9Y6K1 912 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-215ENST00000485550 SEC16AO15027 2179 aa10.32□□□□□ -0.76
HMGN1-215ENST00000485550 FER1L5A0AVI2 2057 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 MGAT4DA6NG13 374 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 CCNYL3P0C7X3 344 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 PYGMP11217 842 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 MTHFD1P11586 935 aaKnown RBP10.31□□□□□ -0.76
HMGN1-215ENST00000485550 FGF5P12034 268 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 ADRA1AP35348 466 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 RWDD2BP57060 319 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 XIAPP98170 497 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 TUBB3Q13509 450 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 SEMA5AQ13591 1074 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 MAP7Q14244 749 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 KRT33BQ14525 404 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 PRPSAP1Q14558 356 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 INPP5JQ15735 1006 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-215ENST00000485550 DNTTIP2Q5QJE6 756 aaKnown RBP10.31□□□□□ -0.76
HMGN1-215ENST00000485550 PWWP2BQ6NUJ5 590 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 CDKL3Q8IVW4 592 aaPredicted RBP10.31□□□□□ -0.76
HMGN1-215ENST00000485550 CFAP206Q8IYR0 622 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 TTC13Q8NBP0 860 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 UBXN4Q92575 508 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 DCUN1D1Q96GG9 259 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 SLC41A2Q96JW4 573 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 PPM1MQ96MI6 270 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 RUFY1Q96T51 708 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 FERMT1Q9BQL6 677 aa10.31□□□□□ -0.76
HMGN1-215ENST00000485550 RAB33BQ9H082 229 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms