RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SPARCL1Q14515 664 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 LCN10Q6JVE6 187 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 CCDC110Q8TBZ0 833 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 THAP4Q8WY91 577 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 CHST8Q9H2A9 424 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 BTRCQ9Y297 605 aa18.72■□□□□ 0.59
COL27A1-205ENST00000485397 AAR2Q9Y312 384 aaKnown RBP18.72■□□□□ 0.59
COL27A1-205ENST00000485397 RELNP78509 3460 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 ARGFXA6NJG6 315 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 KCNN4O15554 427 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 CRTAMO95727 393 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 RBP3P10745 1247 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 RALBP11234 206 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 CDH3P22223 829 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 NDUFS1P28331 727 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 PRLHRP49683 370 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 CCL11P51671 97 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 ZNF140P52738 457 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-205ENST00000485397 EIF3EP60228 445 aaKnown RBP18.71■□□□□ 0.59
COL27A1-205ENST00000485397 ABRQ12979 859 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 PRKAA1Q13131 559 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 PRPSAP1Q14558 356 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 SKOR2Q2VWA4 1001 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-205ENST00000485397 PLEKHS1Q5SXH7 462 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 DENND5AQ6IQ26 1287 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 ZNF517Q6ZMY9 492 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-205ENST00000485397 ATCAYQ86WG3 371 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 CDKL3Q8IVW4 592 aaPredicted RBP18.71■□□□□ 0.59
COL27A1-205ENST00000485397 NXPE1Q8N323 547 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 FAM26EQ8N5C1 309 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 OR8K5Q8NH50 307 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 HM13Q8TCT9 377 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 SEC14L1Q92503 715 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 ULK4Q96C45 1275 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 FERD3LQ96RJ6 166 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 CCM2Q9BSQ5 444 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 LATS2Q9NRM7 1088 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 POMT2Q9UKY4 750 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 PCDHA3Q9Y5H8 950 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 FLNCQ14315 2725 aa18.71■□□□□ 0.59
COL27A1-205ENST00000485397 CCDC66A2RUB6 948 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 PJA2O43164 708 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 KLK3P07288 261 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-205ENST00000485397 PYGMP11217 842 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 ATP1B2P14415 290 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-205ENST00000485397 ITGALP20701 1170 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 CTNNA2P26232 953 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 CTNNA1P35221 906 aaKnown RBP18.7■□□□□ 0.58
COL27A1-205ENST00000485397 CDKN1CP49918 316 aaPredicted RBP18.7■□□□□ 0.58
COL27A1-205ENST00000485397 COPS2P61201 443 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 SPA17Q15506 151 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 FAM69BQ5VUD6 431 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 IZUMO3Q5VZ72 239 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 AADACL2Q6P093 401 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 DARS2Q6PI48 645 aaKnown RBP18.7■□□□□ 0.58
COL27A1-205ENST00000485397 SNX20Q7Z614 316 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 CARFQ8N187 725 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 ACVR1CQ8NER5 493 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 LCN9Q8WX39 176 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 COPS8Q99627 209 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 TBL1YQ9BQ87 522 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 FERMT1Q9BQL6 677 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 SLC25A23Q9BV35 468 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 OSBPL8Q9BZF1 889 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 COG4Q9H9E3 785 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 C1GALT1Q9NS00 363 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 HEBP2Q9Y5Z4 205 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 SPTBP11277 2137 aa18.7■□□□□ 0.58
COL27A1-205ENST00000485397 TNRC6AQ8NDV7 1962 aaKnown RBP18.7■□□□□ 0.58
COL27A1-205ENST00000485397 GSAPA4D1B5 854 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 RCCD1A6NED2 376 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 CFAP99D6REC4 459 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 MEN1O00255 615 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 BTN3A3O00478 584 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 PRSS56P0CW18 603 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 MC4RP32245 332 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 PTGIRP43119 386 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 CCDC170Q8IYT3 715 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 DSELQ8IZU8 1212 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 ENDOVQ8N8Q3 282 aaKnown RBP18.69■□□□□ 0.58
COL27A1-205ENST00000485397 PHC3Q8NDX5 983 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 OR1L3Q8NH93 324 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 SPATA13Q96N96 652 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 LRFN5Q96NI6 719 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 ING2Q9H160 280 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 OR52A5Q9H2C5 316 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 SRMSQ9H3Y6 488 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 ACSS2Q9NR19 701 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 EFR3BQ9Y2G0 817 aa18.69■□□□□ 0.58
COL27A1-205ENST00000485397 MED13Q9UHV7 2174 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 C17orf113A0A1B0GUU1 675 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 TTLL8A6PVC2 850 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 TMEM150CB9EJG8 249 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 BTN3A1O00481 513 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 LDB2O43679 373 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 STK10O94804 968 aaKnown RBP18.68■□□□□ 0.58
COL27A1-205ENST00000485397 GP1BBP13224 206 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 ST6GAL1P15907 406 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 PDHA2P29803 388 aa18.68■□□□□ 0.58
COL27A1-205ENST00000485397 PRDX3P30048 256 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms