RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GSTM4Q03013 218 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 GPS1Q13098 491 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 KRT33BQ14525 404 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 KCNJ11Q14654 390 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 BRD3Q15059 726 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 FASTKD1Q53R41 847 aaKnown RBP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 LYPLAL1Q5VWZ2 237 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 KIAA1614Q5VZ46 1190 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 KLHL35Q6PF15 583 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 NAPRTQ6XQN6 538 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 PHC3Q8NDX5 983 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 OR4E2Q8NGC2 313 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 PEX13Q92968 403 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 RNF31Q96EP0 1072 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 SGSM3Q96HU1 749 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 FERD3LQ96RJ6 166 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 OSBPL9Q96SU4 736 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 NRTNQ99748 197 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 MAP3K3Q99759 626 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 ZPBPQ9BS86 351 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 TREX1Q9NSU2 369 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 HRASLS2Q9NWW9 162 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 SEMA5BQ9P283 1151 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 MARCH4Q9P2E8 410 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 HEBP2Q9Y5Z4 205 aa12.57□□□□□ -0.4
HDAC1-209ENST00000484305 SMG1Q96Q15 3661 aaKnown RBP12.57□□□□□ -0.4
HDAC1-209ENST00000484305 OR6C74A6NCV1 312 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 USP27XA6NNY8 438 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 QSOX1O00391 747 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 IFRD1O00458 451 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 RAD1O60671 282 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 NELFEP18615 380 aaKnown RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 TPSB2P20231 275 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 MGAT1P26572 445 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 NDUFS1P28331 727 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 NMBRP28336 390 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 COILP38432 576 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 ARCN1P48444 511 aaKnown RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CD151P48509 253 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 ATP1A2P50993 1020 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CDK16Q00536 496 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 RHDQ02161 417 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 RPA4Q13156 261 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 TPSAB1Q15661 275 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CYP1B1Q16678 543 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 ANKRD22Q5VYY1 191 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 LRRC8BQ6P9F7 803 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CCDC137Q6PK04 289 aaKnown RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CES3Q6UWW8 571 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CERS6Q6ZMG9 384 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 TIPARPQ7Z3E1 657 aaKnown RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 LDB1Q86U70 411 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 OOSP2Q86WS3 158 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 IL22RA1Q8N6P7 574 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 ACVR1CQ8NER5 493 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 ELMO1Q92556 727 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 TTC9Q92623 222 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 TFGQ92734 400 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-209ENST00000484305 SLC41A2Q96JW4 573 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 OR6C1Q96RD1 312 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 TTC1Q99614 292 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 CATSPERZQ9NTU4 200 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 SYBUQ9NX95 663 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 BFARQ9NZS9 450 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 ATMQ13315 3056 aa12.56□□□□□ -0.4
HDAC1-209ENST00000484305 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 SLC5A10A0PJK1 596 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 TLCD2A6NGC4 264 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 ERVH48-1M5A8F1 160 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 AP3B1O00203 1094 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 PGRMC1O00264 195 aaKnown RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 LIN7AO14910 233 aaPredicted RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 ZNF185O15231 689 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 CD3EAPO15446 510 aaKnown RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 KIF5CO60282 957 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 AVILO75366 819 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 STK17BO94768 372 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 DLGAP3O95886 979 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 FTH1P02794 183 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 PRB1P04280 392 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 OR56A5P0C7T3 313 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 ITGB6P18564 788 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 POLR2CP19387 275 aaPredicted RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 MAGEA6P43360 314 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 KPNA2P52292 529 aaKnown RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 PRKG2Q13237 762 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 BOP1Q14137 746 aaKnown RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 KCNAB1Q14722 419 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 DNTTIP2Q5QJE6 756 aaKnown RBP12.55□□□□□ -0.4
HDAC1-209ENST00000484305 ZNF449Q6P9G9 518 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 OR52E1Q8NGJ3 308 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 ACTRT1Q8TDG2 376 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 LCN9Q8WX39 176 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 CPT1BQ92523 772 aa12.55□□□□□ -0.4
HDAC1-209ENST00000484305 UBXN4Q92575 508 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms