RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TSPAN33Q86UF1 283 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 PLD6Q8N2A8 252 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 TP53I13Q8NBR0 393 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 OR13C4Q8NGS5 318 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 BAHD1Q8TBE0 780 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 PIWIL2Q8TC59 973 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 CXorf40AQ8TE69 158 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 KLHDC7BQ96G42 594 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 TUBGCP5Q96RT8 1024 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 C19orf43Q9BQ61 176 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 MRPL57Q9BQC6 102 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SCNM1Q9BWG6 230 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 MRPL46Q9H2W6 279 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 STN1Q9H668 368 aaKnown RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 POPDC3Q9HBV1 291 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SYTL2Q9HCH5 934 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 ABCF3Q9NUQ8 709 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.84□□□□□ -1.31
BRCA1-216ENST00000484087 B4GALT6Q9UBX8 382 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 ZFP69BQ9UJL9 534 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 EMCNQ9ULC0 261 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 OR1A2Q9Y585 309 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 KCTD3Q9Y597 815 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 SLC30A1Q9Y6M5 507 aa6.84□□□□□ -1.31
BRCA1-216ENST00000484087 COL5A1P20908 1838 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-216ENST00000484087 COL27A1Q8IZC6 1860 aaPredicted RBP6.84□□□□□ -1.32
BRCA1-216ENST00000484087 CFAP47Q6ZTR5 3102 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 USP24Q9UPU5 2620 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 UBA6A0AVT1 1052 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 TSPAN11A1L157 253 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CFAP73A6NFT4 308 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 OR51F1A6NGY5 319 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 NPIPB15A6NHN6 443 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 C1QTNF9BB2RNN3 333 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ANKRD65E5RJM6 399 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 K7ESM1 405 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 BUD23O43709 281 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 FZD6O60353 706 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CCDC22O60826 627 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 SNNO75324 88 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 UBOX5O94941 541 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 PRLP01236 227 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 F7P08709 466 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 C1QTNF9P0C862 333 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 FGF3P11487 239 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CEACAM1P13688 526 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 AKT2P31751 481 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 MC4RP32245 332 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 HMGCLP35914 325 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 SKIV2L2P42285 1042 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 SCTRP47872 440 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CSRP3P50461 194 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ARSDP51689 593 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 HK2P52789 917 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 POLR2LP62875 67 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 IRF9Q00978 393 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 EIF2B5Q13144 721 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 C1orf61Q13536 156 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 FZD2Q14332 565 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ACAP2Q15057 778 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 TYSND1Q2T9J0 566 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ZRANB3Q5FWF4 1079 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CFAP157Q5JU67 520 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 RBM20Q5T481 1227 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM164Q5U3C3 297 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 LYPLAL1Q5VWZ2 237 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 KIAA1161Q6NSJ0 714 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 UGT3A1Q6NUS8 523 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CERS6Q6ZMG9 384 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ZCCHC23Q6ZST2 131 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ABI3BPQ7Z7G0 1075 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 SFTPA2Q8IWL1 248 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 KIRREL3Q8IZU9 778 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 FSTL5Q8N475 847 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 AFAP1L2Q8N4X5 818 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 FITM2Q8N6M3 262 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 MFSD2AQ8NA29 543 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 SAP25Q8TEE9 199 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 KCTD4Q8WVF5 259 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ECHDC3Q96DC8 303 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ERP27Q96DN0 273 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 RMDN2Q96LZ7 410 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 RILPQ96NA2 401 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 NDNQ99608 321 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 USB1Q9BQ65 265 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 C1QTNF2Q9BXJ5 285 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM120AQ9BXJ8 343 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 OSBPL1AQ9BXW6 950 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CPEB1Q9BZB8 566 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ZDHHC5Q9C0B5 715 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ILKAPQ9H0C8 392 aaPredicted RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 SLC32A1Q9H598 525 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ZFYVE1Q9HBF4 777 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 MRPL40Q9NQ50 206 aaKnown RBP6.83□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF358Q9NW07 568 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 OXSMQ9NWU1 459 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 DNAJC28Q9NX36 388 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 TAS2R13Q9NYV9 303 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 NCKIPSDQ9NZQ3 722 aa6.83□□□□□ -1.32
BRCA1-216ENST00000484087 CPSF2Q9P2I0 782 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms