RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ADPRHL2Q9NX46 363 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 OGFRQ9NZT2 677 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 MPP6Q9NZW5 540 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PAK5Q9P286 719 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 XPO7Q9UIA9 1087 aaKnown RBP2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 PCDHGB4Q9UN71 923 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 RNF215Q9Y6U7 377 aa2.84□□□□□ -1.95
LAPTM4A-202ENST00000483117 KDM3AQ9Y4C1 1321 aa2.84□□□□□ -1.96
LAPTM4A-202ENST00000483117 OR5K3A6NET4 321 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 DUXAA6NLW8 204 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 A8MXE2 369 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 FAM90A26D6RGX4 464 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TMEM178BH3BS89 294 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PSMD14O00487 310 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 UBE2CO00762 179 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 SH2B2O14492 632 aaPredicted RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 NDC80O14777 642 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 HS3ST1O14792 307 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TNFSF14O43557 240 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 STX6O43752 255 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 B3GALNT1O75752 331 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 SLU7O95391 586 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PGM3O95394 542 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TGDSO95455 350 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TSHBP01222 138 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 MT-ND3P03897 115 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 NR3C1P04150 777 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZNF23P17027 643 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 IFNAR1P17181 557 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 HLA-DPA1P20036 260 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 SAT1P21673 171 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 NFKBIAP25963 317 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 ACSL1P33121 698 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TCF7P36402 384 aaPredicted RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 EIF2DP41214 584 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 NOVP48745 357 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZNF41P51814 821 aaPredicted RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 EIF3BP55884 814 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 EVCP57679 992 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 DSCR10P59022 87 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 MBTD1Q05BQ5 628 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TAF7Q15545 349 aaPredicted RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PKN2Q16513 984 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 C2orf76Q3KRA6 126 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 KRTCAP3Q53RY4 240 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 KRT80Q6KB66 452 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TMEM154Q6P9G4 183 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 SARM1Q6SZW1 724 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PET117Q6UWS5 81 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PLEKHM3Q6ZWE6 761 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 IKBIPQ70UQ0 350 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 CACNA2D4Q7Z3S7 1137 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 METTL23Q86XA0 190 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 SPC24Q8NBT2 197 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 KCTD6Q8NC69 237 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZNF473Q8WTR7 871 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 IGSF8Q969P0 613 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PHF21AQ96BD5 680 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 ZNF689Q96CS4 500 aaPredicted RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 GBP5Q96PP8 586 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 CITED2Q99967 270 aaPredicted RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PSD2Q9BQI7 771 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 CDK19Q9BWU1 502 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 ABCG4Q9H172 646 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 RANBP17Q9H2T7 1088 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 KIF9Q9HAQ2 790 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 SLC28A3Q9HAS3 691 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 TRPC7Q9HCX4 862 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 INTS10Q9NVR2 710 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 EHD2Q9NZN4 543 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 KLHL9Q9P2J3 617 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 CACNG5Q9UF02 275 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 MOSPD1Q9UJG1 213 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 MRPS28Q9Y2Q9 187 aaKnown RBP2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 CCL27Q9Y4X3 112 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 PIAS3Q9Y6X2 628 aa2.83□□□□□ -1.96
LAPTM4A-202ENST00000483117 A0A1W2PP11 408 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 A0A1W2PPI3 338 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 A0A1W2PQM1 296 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 NPIPB15A6NHN6 443 aaPredicted RBP2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 CCDC69A6NI79 296 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 TRIM64CA6NLI5 447 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 LRRC53A6NM62 1247 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 ANKRD28O15084 1053 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 SLC7A4O43246 635 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 TGFB1I1O43294 461 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 SEC14L2O76054 403 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 GOSR1O95249 250 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 CCDC175P0C221 793 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 IL7RP16871 459 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 MSH3P20585 1137 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 TM4SF1P30408 202 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 MAPK4P31152 587 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 CPOXP36551 454 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 RPL7AP62424 266 aaKnown RBP2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 YWHAHQ04917 246 aaPredicted RBP2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 ITGA9Q13797 1035 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 KIR2DS3Q14952 304 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 TNIP1Q15025 636 aa2.82□□□□□ -1.96
LAPTM4A-202ENST00000483117 ADIPOQQ15848 244 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms