RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 ZDHHC12Q96GR4 267 aa6.24□□□□□ -1.41
CHD6-209ENST00000482596 PLEKHG4BQ96PX9 1271 aa6.24□□□□□ -1.41
CHD6-209ENST00000482596 HES7Q9BYE0 225 aa6.24□□□□□ -1.41
CHD6-209ENST00000482596 APOBEC3GQ9HC16 384 aaKnown RBP6.24□□□□□ -1.41
CHD6-209ENST00000482596 GOLGA6AQ9NYA3 693 aa6.24□□□□□ -1.41
CHD6-209ENST00000482596 SMC3Q9UQE7 1217 aa6.24□□□□□ -1.41
CHD6-209ENST00000482596 CDYLQ9Y232 598 aa6.24□□□□□ -1.41
CHD6-209ENST00000482596 KCNK6Q9Y257 313 aa6.24□□□□□ -1.41
CHD6-209ENST00000482596 EPN1Q9Y6I3 576 aaPredicted RBP6.24□□□□□ -1.41
CHD6-209ENST00000482596 A8MX80 341 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 H3BRJ5 948 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 KIAA0391O15091 583 aaKnown RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 GSRP00390 522 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 F3P13726 295 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 PTGER1P34995 402 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 DEKP35659 375 aaKnown RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 SOX5P35711 763 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ARL4DP49703 201 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 CYP2J2P51589 502 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 PLCL1Q15111 1095 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 SGSM1Q2NKQ1 1148 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 C6orf52Q5T4I8 152 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 C1orf189Q5VU69 101 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ATG9BQ674R7 924 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ARHGAP17Q68EM7 881 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 MCTP1Q6DN14 999 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 RETSATQ6NUM9 610 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 KIRREL2Q6UWL6 708 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 DTHD1Q6ZMT9 781 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 PAQR7Q86WK9 346 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ZNF354CQ86Y25 554 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 SCML4Q8N228 414 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 Q8N3U1 123 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 LZTR1Q8N653 840 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 FAM57AQ8TBR7 257 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 BRIX1Q8TDN6 353 aaKnown RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 SNX21Q969T3 373 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ISG20Q96AZ6 181 aaKnown RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 RBMXL1Q96E39 390 aaKnown RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 ZBED6CLQ96FA7 236 aaPredicted RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 SIGLEC12Q96PQ1 595 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ARPC5LQ9BPX5 153 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 TLR10Q9BXR5 811 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 C12orf65Q9H3J6 166 aaKnown RBP6.23□□□□□ -1.41
CHD6-209ENST00000482596 SP110Q9HB58 689 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ARNT2Q9HBZ2 717 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ATP13A1Q9HD20 1204 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 GPATCH2LQ9NWQ4 482 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 ZNF69Q9UC07 566 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 EPHA6Q9UF33 1036 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 TSPAN16Q9UKR8 245 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 SNX10Q9Y5X0 201 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 NPFFR2Q9Y5X5 522 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 HS3ST3B1Q9Y662 390 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 MED12Q93074 2177 aa6.23□□□□□ -1.41
CHD6-209ENST00000482596 YLPM1P49750 1951 aaKnown RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 DYNC2H1Q8NCM8 4307 aaKnown RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 HERC2O95714 4834 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 SYNJ2BP-COX16A0A087WUM0 186 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 KIR2DS5A0A0G2JLQ3 304 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 A0A0G2JNG1 304 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 GRID2IPA4D2P6 1211 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 LRRIQ3A6PVS8 624 aaPredicted RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 KIR2DS3K7RE56 304 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 IKBKBO14920 756 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 GPRIN2O60269 458 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 IGLV3-25P01717 112 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 ITGA2P17301 1181 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 SRD5A1P18405 259 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 AGXTP21549 392 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 HOXD13P35453 343 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 ST13P50502 369 aaKnown RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 TOB1P50616 345 aaPredicted RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 RAD23BP54727 409 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 SLC8A3P57103 927 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 SNRPD1P62314 119 aaKnown RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 HSD11B2P80365 405 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 SLC20A2Q08357 652 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 EIF4EBP2Q13542 120 aaPredicted RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 KIR2DS5Q14953 304 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 HYAL4Q2M3T9 481 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 RILPL1Q5EBL4 403 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 ZNF766Q5HY98 468 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 ACAD11Q709F0 780 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 CHST15Q7LFX5 561 aaPredicted RBP6.22□□□□□ -1.41
CHD6-209ENST00000482596 OR10Q1Q8NGQ4 319 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 OR8K5Q8NH50 307 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 LINC01560Q8TB33 94 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 SLC22A8Q8TCC7 542 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 IRGQQ8WZA9 623 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 RAD54LQ92698 747 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 FAM149B1Q96BN6 582 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 PPM1MQ96MI6 270 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 CCL19Q99731 98 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 REG4Q9BYZ8 158 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 MIS12Q9H081 205 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 CUEDC2Q9H467 287 aa6.22□□□□□ -1.41
CHD6-209ENST00000482596 UCK1Q9HA47 277 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms