RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MECRQ9BV79 373 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 CCDC106Q9BWC9 280 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 CADM1Q9BY67 442 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 ACE2Q9BYF1 805 aaPredicted RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 NMUR2Q9GZQ4 415 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 POLR1EQ9GZS1 481 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 DRC3Q9H069 523 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 MRPL46Q9H2W6 279 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 C12orf65Q9H3J6 166 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 TASP1Q9H6P5 420 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 NMUR1Q9HB89 426 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 POPDC3Q9HBV1 291 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 EML4Q9HC35 981 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 ARL8BQ9NVJ2 186 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 TAS2R1Q9NYW7 299 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 NCKIPSDQ9NZQ3 722 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 TMEM216Q9P0N5 145 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 USP36Q9P275 1121 aaKnown RBP7.66□□□□□ -1.18
SNX13-208ENST00000482558 CBLCQ9ULV8 474 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 EDARQ9UNE0 448 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 C15orf41Q9Y2V0 281 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 NR2E3Q9Y5X4 410 aa7.66□□□□□ -1.18
SNX13-208ENST00000482558 CCDC195A0A1B0GUA6 201 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 LOC285095A0A1B0GVY8 99 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 CCDC154A6NI56 674 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 F5H5T6 163 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 G3V2L1 256 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 HGSO14964 777 aaPredicted RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 HDAC3O15379 428 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 TBC1D4O60343 1298 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 FOXD2O60548 495 aaPredicted RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 FKBP6O75344 327 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 TM7SF2O76062 418 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 VAPBO95292 243 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 LATS1O95835 1130 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 MOCS2O96007 188 aaPredicted RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 AHSGP02765 367 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 HLA-DQB2P05538 268 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 CHMP24386 653 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 ATP5F1P24539 256 aaPredicted RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 RPL10P27635 214 aaKnown RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 NMBRP28336 390 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 MAP2K2P36507 400 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 ATP5C1P36542 298 aaKnown RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 RPL14P50914 215 aaKnown RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 CDH4P55283 916 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 SATB1Q01826 763 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 TEKQ02763 1124 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 EFEMP1Q12805 493 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 ITGA9Q13797 1035 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 RCN2Q14257 317 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 ERV3-1Q14264 604 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 PTK2BQ14289 1009 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 DEFB115Q30KQ5 88 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 RALGPS1Q5JS13 557 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 C10orf120Q5SQS8 335 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 TSTD2Q5T7W7 516 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 TPGS2Q68CL5 300 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 MRNIPQ6NTE8 343 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 FUT10Q6P4F1 479 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 AAGABQ6PD74 315 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 EPGNQ6UW88 154 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 CES3Q6UWW8 571 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 ZNF783Q6ZMS7 281 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 APLFQ8IW19 511 aaPredicted RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.65□□□□□ -1.18
SNX13-208ENST00000482558 GPR65Q8IYL9 337 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 UNC5BQ8IZJ1 945 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 LRRC43Q8N309 656 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 PPFIBP2Q8ND30 876 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 GPR150Q8NGU9 434 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 TADA1Q96BN2 335 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 CNDP1Q96KN2 507 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 CASD1Q96PB1 797 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 AGAP2Q99490 1192 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 C19orf43Q9BQ61 176 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 MFSD1Q9H3U5 465 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 ZCCHC4Q9H5U6 513 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 MRPL40Q9NQ50 206 aaKnown RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 FBXO6Q9NRD1 293 aaPredicted RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 ZNF212Q9UDV6 495 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 MSRAQ9UJ68 235 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 FBXO5Q9UKT4 447 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 ANGPTL2Q9UKU9 493 aa7.65□□□□□ -1.18
SNX13-208ENST00000482558 RUVBL2Q9Y230 463 aaKnown RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 PRG3Q9Y2Y8 225 aaPredicted RBP7.65□□□□□ -1.18
SNX13-208ENST00000482558 TRBV23OR9-2A0A075B6M9 112 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 TMEM82A0PJX8 343 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 MTMR11A4FU01 709 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 MROH6A6NGR9 719 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 ISM1B1AKI9 464 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 DVL2O14641 736 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 LIN7AO14910 233 aaPredicted RBP7.64□□□□□ -1.19
SNX13-208ENST00000482558 MSI1O43347 362 aaKnown RBP7.64□□□□□ -1.19
SNX13-208ENST00000482558 PRAMEF11O60813 436 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 PEX11AO75192 247 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 SEMA7AO75326 666 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 PMPCBO75439 489 aa7.64□□□□□ -1.19
SNX13-208ENST00000482558 CLDN11O75508 207 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 552.5 ms