RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 MR1Q95460 341 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 COL26A1Q96A83 441 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 DNAJC1Q96KC8 554 aaKnown RBP6.51□□□□□ -1.37
FN1-220ENST00000480024 SPATA13Q96N96 652 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 CD180Q99467 661 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 COPS8Q99627 209 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 NRTNQ99748 197 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 TUBB2BQ9BVA1 445 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 TLR10Q9BXR5 811 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 AKIRIN1Q9H9L7 192 aaPredicted RBP6.51□□□□□ -1.37
FN1-220ENST00000480024 SEMA5BQ9P283 1151 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 POMT2Q9UKY4 750 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 ACSL5Q9ULC5 683 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 PLAAQ9Y263 795 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 AAR2Q9Y312 384 aaKnown RBP6.51□□□□□ -1.37
FN1-220ENST00000480024 PCDHGA6Q9Y5G7 932 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 PCDHA3Q9Y5H8 950 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 DNMT3AQ9Y6K1 912 aaPredicted RBP6.51□□□□□ -1.37
FN1-220ENST00000480024 DUSP10Q9Y6W6 482 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 FER1L5A0AVI2 2057 aa6.51□□□□□ -1.37
FN1-220ENST00000480024 CCDC78A2IDD5 438 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 CCDC66A2RUB6 948 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 KLHL33A6NCF5 533 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ARGFXA6NJG6 315 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 SLC9B1P1A6NJY1 282 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 CFAP99D6REC4 459 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 TJP3O95049 919 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ZBTB11O95625 1053 aaPredicted RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 PRSS56P0CW18 603 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PYGMP11217 842 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ATP1B2P14415 290 aaPredicted RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 CDH3P22223 829 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 NDUFS1P28331 727 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PTPN4P29074 926 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 MC4RP32245 332 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PTPN7P35236 360 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 HADHAP40939 763 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PREPP48147 710 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 CDKN1CP49918 316 aaPredicted RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 PDE1BQ01064 536 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 KLRB1Q12918 225 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ABRQ12979 859 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PRKAA1Q13131 559 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 GPS2Q13227 327 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 IL10RAQ13651 578 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ZRANB3Q5FWF4 1079 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PRAMEF17Q5VTA0 474 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 DENND5AQ6IQ26 1287 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 TCTN3Q6NUS6 607 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ARHGEF18Q6ZSZ5 1173 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ASB18Q6ZVZ8 466 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 TAS2R42Q7RTR8 314 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 SNX20Q7Z614 316 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 CFAP206Q8IYR0 622 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 TEX19Q8NA77 164 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ACRBPQ8NEB7 543 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 LCN9Q8WX39 176 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ULK4Q96C45 1275 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 LRRC45Q96CN5 670 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ZNF501Q96CX3 271 aaPredicted RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 LINC00615Q96LM1 132 aaPredicted RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 FCRL4Q96PJ5 515 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PANX2Q96RD6 677 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 FERD3LQ96RJ6 166 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 HGH1Q9BTY7 390 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 TRIM55Q9BYV6 548 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 LACRTQ9GZZ8 138 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 KLHL25Q9H0H3 589 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 SRMSQ9H3Y6 488 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 COG4Q9H9E3 785 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 FANCEQ9HB96 536 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PIH1D1Q9NWS0 290 aaKnown RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 TLK1Q9UKI8 766 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 PACSIN2Q9UNF0 486 aaPredicted RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 EFR3BQ9Y2G0 817 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 REXO2Q9Y3B8 237 aaKnown RBP6.5□□□□□ -1.37
FN1-220ENST00000480024 HEBP2Q9Y5Z4 205 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 COLEC10Q9Y6Z7 277 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 RELNP78509 3460 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 NOTCH2Q04721 2471 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 ICE1Q9Y2F5 2266 aa6.5□□□□□ -1.37
FN1-220ENST00000480024 IGLV3-16A0A075B6K0 115 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 GRID2IPA4D2P6 1211 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 AGAP14A8MT82 685 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 TMEM150CB9EJG8 249 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 IFRD1O00458 451 aaPredicted RBP6.49□□□□□ -1.37
FN1-220ENST00000480024 BTN3A3O00478 584 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 BTN3A1O00481 513 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 LDB2O43679 373 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 PDGFAP04085 211 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 ATXN8OSP0DMR3 200 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 PVRP15151 417 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 TPH1P17752 444 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 CYP2A7P20853 494 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 ACRV1P26436 265 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 PDHA2P29803 388 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 CETN2P41208 172 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 PTGIRP43119 386 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 LMAN1P49257 510 aa6.49□□□□□ -1.37
FN1-220ENST00000480024 ZNF75DP51815 510 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms