RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 SPAG6O75602 509 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 FTCDO95954 541 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 OAS2P29728 719 aaKnown RBP13.99□□□□□ -0.17
ATG4B-218ENST00000479554 MC4RP32245 332 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 DLSTP36957 453 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 PRLHRP49683 370 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 ARL4DP49703 201 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 MSLNQ13421 630 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-218ENST00000479554 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.99□□□□□ -0.17
ATG4B-218ENST00000479554 C16orf46Q6P387 395 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 ATG14Q6ZNE5 492 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 KMT5CQ86Y97 462 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 KLHDC8BQ8IXV7 354 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 FAM71DQ8N9W8 422 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 SPDYE1Q8NFV5 336 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-218ENST00000479554 HM13Q8TCT9 377 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 HEXDCQ8WVB3 486 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 SLC41A2Q96JW4 573 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 DNAJC1Q96KC8 554 aaKnown RBP13.99□□□□□ -0.17
ATG4B-218ENST00000479554 RMDN2Q96LZ7 410 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 MAP3K3Q99759 626 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 TRIM4Q9C037 500 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 FAM96AQ9H5X1 160 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 KIR3DX1Q9H7L2 352 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 SEMA5BQ9P283 1151 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 RNF14Q9UBS8 474 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 RARRES3Q9UL19 164 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 PACSIN2Q9UNF0 486 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-218ENST00000479554 MRPS18BQ9Y676 258 aaKnown RBP13.99□□□□□ -0.17
ATG4B-218ENST00000479554 SPTA1P02549 2419 aa13.99□□□□□ -0.17
ATG4B-218ENST00000479554 UBA6A0AVT1 1052 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CTAGE15A4D2H0 777 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CCL22O00626 93 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CES2O00748 559 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 SUV39H1O43463 412 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 LDB2O43679 373 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 MT-ND3P03897 115 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 POLBP06746 335 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CTAGE8P0CG41 777 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 ATP1B2P14415 290 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-218ENST00000479554 NDUFS1P28331 727 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 ACY1Q03154 408 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 SEPT6Q14141 434 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 KRT33BQ14525 404 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 KCNAB1Q14722 419 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 PARP6Q2NL67 630 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 DEFB109BQ30KR1 87 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 GPR33Q49SQ1 333 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CRTC2Q53ET0 693 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-218ENST00000479554 ATP1A1-AS1Q5TC04 95 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CTAGE6Q86UF2 777 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CTAGE4Q8IX94 777 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CFAP206Q8IYR0 622 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 LILRA3Q8N6C8 439 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-218ENST00000479554 ZFPM2Q8WW38 1151 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CCM2Q9BSQ5 444 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 CLMPQ9H6B4 373 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 LRRC40Q9H9A6 602 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 HRASLS2Q9NWW9 162 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 SLC24A2Q9UI40 661 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 PCDHB3Q9Y5E6 796 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 HEBP2Q9Y5Z4 205 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 COLEC10Q9Y6Z7 277 aa13.98□□□□□ -0.17
ATG4B-218ENST00000479554 UBR5O95071 2799 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-218ENST00000479554 OR6C74A6NCV1 312 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 DDX3YO15523 660 aaKnown RBP13.97□□□□□ -0.17
ATG4B-218ENST00000479554 KATNA1O75449 491 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 WISP1O95388 367 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 METTL18O95568 372 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 CCNYL3P0C7X3 344 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 EBLN1P0CF75 366 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 FOLR1P15328 257 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 F8A1P23610 371 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 HSD11B2P80365 405 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 KCNC4Q03721 635 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 KLF1Q13351 362 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-218ENST00000479554 P3H1Q32P28 736 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 ZRANB3Q5FWF4 1079 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 KCTD11Q693B1 232 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 CAPRIN2Q6IMN6 1127 aaKnown RBP13.97□□□□□ -0.17
ATG4B-218ENST00000479554 LRRN4CLQ8ND94 238 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 APOBEC4Q8WW27 367 aaKnown RBP13.97□□□□□ -0.17
ATG4B-218ENST00000479554 PBKQ96KB5 322 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 VPS37BQ9H9H4 285 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 ZDHHC3Q9NYG2 299 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 KCND3Q9UK17 655 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 PADI1Q9ULC6 663 aa13.97□□□□□ -0.17
ATG4B-218ENST00000479554 R3HDM2Q9Y2K5 976 aaKnown RBP13.97□□□□□ -0.17
ATG4B-218ENST00000479554 FLNBO75369 2602 aaKnown RBP13.97□□□□□ -0.17
ATG4B-218ENST00000479554 MYO18BQ8IUG5 2567 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 IGLV3-16A0A075B6K0 115 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 C17orf113A0A1B0GUU1 675 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 H7C0S8 307 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 TERTO14746 1132 aaKnown RBP13.96□□□□□ -0.17
ATG4B-218ENST00000479554 TIAF1O95411 115 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 TPH1P17752 444 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 ACRV1P26436 265 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 PAFAH1B1P43034 410 aa13.96□□□□□ -0.17
ATG4B-218ENST00000479554 ARCN1P48444 511 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms