RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 LAPTM5Q13571 262 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 NAA25Q14CX7 972 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ACOX1Q15067 660 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 TPSAB1Q15661 275 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PLK5Q496M5 336 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 GLE1Q53GS7 698 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 LRRC73Q5JTD7 316 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 SIRPB2Q5JXA9 342 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 SH2D4BQ5SQS7 431 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ZDHHC20Q5W0Z9 365 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PMS2CLQ68D20 193 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 DENND2CQ68D51 928 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 KDM7AQ6ZMT4 941 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 CCDC80Q76M96 950 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 GLT6D1Q7Z4J2 308 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 HOOK3Q86VS8 718 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 TMEFF1Q8IYR6 380 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 EIF1ADQ8N9N8 165 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 RCBTB1Q8NDN9 531 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 DENND6BQ8NEG7 585 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PPHLN1Q8NEY8 458 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.14□□□□□ -1.434e-32■□□□□ 8.6
SF3B1-209ENST00000479532 BLOC1S5Q8TDH9 187 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ASB11Q8WXH4 323 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ASB12Q8WXK4 309 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 THOC1Q96FV9 657 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 SNF8Q96H20 258 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 LOXL4Q96JB6 756 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ZC3H10Q96K80 434 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 MCCC1Q96RQ3 725 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 TRIB3Q96RU7 358 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 LYSMD1Q96S90 227 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 GORASP1Q9BQQ3 440 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 WRAP53Q9BUR4 548 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 FRMD8Q9BZ67 464 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 EPC1Q9H2F5 836 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 C6orf106Q9H6K1 298 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 XAB2Q9HCS7 855 aaKnown RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 SLC40A1Q9NP59 571 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 CD93Q9NPY3 652 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 B4GALT6Q9UBX8 382 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 MBD1Q9UIS9 605 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ITM2BQ9Y287 266 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 PKP3Q9Y446 797 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ZNF711Q9Y462 761 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 R4GN57 208 aa6.14□□□□□ -1.43
SF3B1-209ENST00000479532 ZNF318Q5VUA4 2279 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ZDBF2Q9HCK1 2354 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 TRBV23OR9-2A0A075B6M9 112 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 A0A1W2PPC4 97 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 HEATR9A2RTY3 570 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 RGSL1A5PLK6 1076 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 IGLON5A6NGN9 336 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 NPIPB15A6NHN6 443 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 A8MX80 341 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 PRAMEF26H0Y7S4 382 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 DNALI1O14645 258 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 TOR1BO14657 336 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 FPGTO14772 594 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 WNT9AO14904 365 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 AREL1O15033 823 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 BIRC5O15392 142 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SUN1O94901 812 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 HEXIM1O94992 359 aaKnown RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SLC4A1P02730 911 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 PRKCGP05129 697 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ATXN1LP0C7T5 689 aaKnown RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 C6P13671 934 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 NAT1P18440 290 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 POU3F2P20265 443 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 BCKDHBP21953 392 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 CD27P26842 260 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 MAT2AP31153 395 aaKnown RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ADRA1AP35348 466 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 HOXD12P35452 270 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 HADHAP40939 763 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 NPY2RP49146 381 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 TAS2R38P59533 333 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 TCF15Q12870 199 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SRSF5Q13243 272 aaKnown RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 SPARCL1Q14515 664 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 STAT4Q14765 748 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 MORF4L2Q15014 288 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 TAF1AQ15573 450 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-209ENST00000479532 CNGA3Q16281 694 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ZNF284Q2VY69 593 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 IZUMO3Q5VZ72 239 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 ARMC3Q5W041 872 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 LRRC66Q68CR7 880 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 KCTD11Q693B1 232 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 LAIR1Q6GTX8 287 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 LRRC8BQ6P9F7 803 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 EMBQ6PCB8 327 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 RANBP10Q6VN20 620 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 CYP2R1Q6VVX0 501 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 LIPIQ6XZB0 460 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 CEP128Q6ZU80 1094 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 PRUNE1Q86TP1 453 aa6.13□□□□□ -1.43
SF3B1-209ENST00000479532 LCA5Q86VQ0 697 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms