RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 GPN3Q9UHW5 284 aaPredicted RBP16.68■□□□□ 0.26
VIM-204ENST00000478746 POMT2Q9UKY4 750 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 ACSL5Q9ULC5 683 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 PDZD2O15018 2839 aa16.68■□□□□ 0.26
VIM-204ENST00000478746 MGAT4DA6NG13 374 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 MT-CYBP00156 380 aaPredicted RBP16.67■□□□□ 0.26
VIM-204ENST00000478746 SOX8P57073 446 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 PPP2R5EQ16537 467 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 FNBP1LQ5T0N5 605 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 B4GALNT4Q76KP1 1039 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 SPDYE1Q8NFV5 336 aaPredicted RBP16.67■□□□□ 0.26
VIM-204ENST00000478746 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 DTX3LQ8TDB6 740 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 TADA1Q96BN2 335 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 FAF2Q96CS3 445 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 C17orf62Q9BQA9 187 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 ATP13A2Q9NQ11 1180 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 P4HTMQ9NXG6 502 aa16.67■□□□□ 0.26
VIM-204ENST00000478746 PTRH2Q9Y3E5 179 aaKnown RBP16.67■□□□□ 0.26
VIM-204ENST00000478746 ADGRG4Q8IZF6 3080 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 SVILO95425 2214 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 HEATR9A2RTY3 570 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 GSAPA4D1B5 854 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 MATN2O00339 956 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 PMPCBO75439 489 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 CYP1A2P05177 515 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 CD63P08962 238 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 SLC35G4P0C7Q5 338 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 ST6GAL1P15907 406 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 ITGA3P26006 1051 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 NDUFS1P28331 727 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 PRDX3P30048 256 aaKnown RBP16.66■□□□□ 0.26
VIM-204ENST00000478746 SPAM1P38567 509 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 FOLR3P41439 243 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 LMAN1P49257 510 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 LONRF2Q1L5Z9 754 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 ZFYVE27Q5T4F4 411 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 GPRC6AQ5T6X5 926 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 ZNF385CQ66K41 422 aaPredicted RBP16.66■□□□□ 0.26
VIM-204ENST00000478746 FAM151BQ6UXP7 276 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 ZC3H18Q86VM9 953 aaKnown RBP16.66■□□□□ 0.26
VIM-204ENST00000478746 GPR135Q8IZ08 494 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 DDHD1Q8NEL9 900 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 GRHL3Q8TE85 626 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 HSD3B7Q9H2F3 369 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 SRMSQ9H3Y6 488 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 TRABDQ9H4I3 376 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 RTN4Q9NQC3 1192 aaKnown RBP16.66■□□□□ 0.26
VIM-204ENST00000478746 ANO10Q9NW15 660 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 HEY1Q9Y5J3 304 aa16.66■□□□□ 0.26
VIM-204ENST00000478746 CNTRLQ7Z7A1 2325 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 SETD2Q9BYW2 2564 aaPredicted RBP16.65■□□□□ 0.26
VIM-204ENST00000478746 MASP2O00187 686 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 GPR39O43194 453 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 POLBP06746 335 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 ATXN8OSP0DMR3 200 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 CBSLP0DN79 551 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 EDN3P14138 238 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 MSH3P20585 1137 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 AKT1P31749 480 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 CBSP35520 551 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 ITGA9Q13797 1035 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 SLC14A2Q15849 920 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 ZXDCQ2QGD7 858 aaPredicted RBP16.65■□□□□ 0.26
VIM-204ENST00000478746 SASS6Q6UVJ0 657 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 DET1Q7L5Y6 550 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 CPNE8Q86YQ8 564 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 OR2L2Q8NH16 312 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 LCN9Q8WX39 176 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 PTERQ96BW5 349 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 RNF157Q96PX1 679 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 WDR77Q9BQA1 342 aaPredicted RBP16.65■□□□□ 0.26
VIM-204ENST00000478746 KLHL25Q9H0H3 589 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 UBP1Q9NZI7 540 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 IL17CQ9P0M4 197 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 COPG2Q9UBF2 871 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 FAM8A1Q9UBU6 413 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 HEBP2Q9Y5Z4 205 aa16.65■□□□□ 0.26
VIM-204ENST00000478746 CELSR1Q9NYQ6 3014 aa16.64■□□□□ 0.26
VIM-204ENST00000478746 GLYATL1P3A0A0U1RQE8 302 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 A0A1B0GUH1 482 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 KLHL33A6NCF5 533 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 HIF1AQ16665 826 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 CYP2A13Q16696 494 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 C1orf189Q5VU69 101 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 RBM43Q6ZSC3 357 aaKnown RBP16.64■□□□□ 0.25
VIM-204ENST00000478746 ACVR1CQ8NER5 493 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 OR2Y1Q8NGV0 311 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 DNAJB14Q8TBM8 379 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 FAR1Q8WVX9 515 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 N4BP2L2Q92802 583 aaPredicted RBP16.64■□□□□ 0.25
VIM-204ENST00000478746 TRAPPC9Q96Q05 1148 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 GLOD4Q9HC38 313 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 IFT80Q9P2H3 777 aaPredicted RBP16.64■□□□□ 0.25
VIM-204ENST00000478746 NDOR1Q9UHB4 597 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 NOVA2Q9UNW9 492 aaKnown RBP16.64■□□□□ 0.25
VIM-204ENST00000478746 CSAG2Q9Y5P2 127 aa16.64■□□□□ 0.25
VIM-204ENST00000478746 FER1L5A0AVI2 2057 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 ANKRD12Q6UB98 2062 aa16.63■□□□□ 0.25
VIM-204ENST00000478746 E2F3O00716 465 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms