RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 NFKBIDQ8NI38 313 aa2.55□□□□□ -2
HPS3-205ENST00000478525 GSDMBQ8TAX9 411 aa2.55□□□□□ -2
HPS3-205ENST00000478525 GCC1Q96CN9 775 aa2.55□□□□□ -2
HPS3-205ENST00000478525 RNF125Q96EQ8 232 aa2.55□□□□□ -2
HPS3-205ENST00000478525 TRAF4Q9BUZ4 470 aaPredicted RBP2.55□□□□□ -2
HPS3-205ENST00000478525 PUS3Q9BZE2 481 aaKnown RBP2.55□□□□□ -2
HPS3-205ENST00000478525 DENND2DQ9H6A0 471 aaPredicted RBP2.55□□□□□ -2
HPS3-205ENST00000478525 SLA2Q9H6Q3 261 aa2.55□□□□□ -2
HPS3-205ENST00000478525 FBXL17Q9UF56 701 aa2.55□□□□□ -2
HPS3-205ENST00000478525 TSPYL4Q9UJ04 414 aa2.55□□□□□ -2
HPS3-205ENST00000478525 TUBE1Q9UJT0 475 aa2.55□□□□□ -2
HPS3-205ENST00000478525 PPP1R3CQ9UQK1 317 aa2.55□□□□□ -2
HPS3-205ENST00000478525 RIPK3Q9Y572 518 aa2.55□□□□□ -2
HPS3-205ENST00000478525 KDM3AQ9Y4C1 1321 aa2.54□□□□□ -2
HPS3-205ENST00000478525 A0A1W2PQF6 199 aa2.54□□□□□ -2
HPS3-205ENST00000478525 PHOX2AO14813 284 aa2.54□□□□□ -2
HPS3-205ENST00000478525 SMAD9O15198 467 aaKnown RBP2.54□□□□□ -2
HPS3-205ENST00000478525 DAB1O75553 588 aa2.54□□□□□ -2
HPS3-205ENST00000478525 CNTFP26441 200 aa2.54□□□□□ -2
HPS3-205ENST00000478525 VAMP2P63027 116 aa2.54□□□□□ -2
HPS3-205ENST00000478525 CEBPZQ03701 1054 aaKnown RBP2.54□□□□□ -2
HPS3-205ENST00000478525 TLE2Q04725 743 aa2.54□□□□□ -2
HPS3-205ENST00000478525 PPFIA1Q13136 1202 aa2.54□□□□□ -2
HPS3-205ENST00000478525 LY6DQ14210 128 aa2.54□□□□□ -2
HPS3-205ENST00000478525 MEP1AQ16819 746 aa2.54□□□□□ -2
HPS3-205ENST00000478525 TPRG1Q6ZUI0 275 aa2.54□□□□□ -2
HPS3-205ENST00000478525 SLC47A2Q86VL8 602 aa2.54□□□□□ -2
HPS3-205ENST00000478525 GALNT13Q8IUC8 556 aa2.54□□□□□ -2
HPS3-205ENST00000478525 ZNF582Q96NG8 517 aaPredicted RBP2.54□□□□□ -2
HPS3-205ENST00000478525 SEPT5Q99719 369 aaPredicted RBP2.54□□□□□ -2
HPS3-205ENST00000478525 PIP5K1AQ99755 562 aa2.54□□□□□ -2
HPS3-205ENST00000478525 SPHK2Q9NRA0 654 aa2.54□□□□□ -2
HPS3-205ENST00000478525 R3HDM2Q9Y2K5 976 aaKnown RBP2.54□□□□□ -2
HPS3-205ENST00000478525 ATRXP46100 2492 aa2.54□□□□□ -2
HPS3-205ENST00000478525 ARHGEF40Q8TER5 1519 aa2.53□□□□□ -2
HPS3-205ENST00000478525 SOS1Q07889 1333 aaPredicted RBP2.53□□□□□ -2
HPS3-205ENST00000478525 LOC101059948A0A1B0GTJ6 334 aa2.53□□□□□ -2
HPS3-205ENST00000478525 SLC25A12O75746 678 aa2.53□□□□□ -2
HPS3-205ENST00000478525 PIGNO95427 931 aa2.53□□□□□ -2
HPS3-205ENST00000478525 ABCD3P28288 659 aa2.53□□□□□ -2
HPS3-205ENST00000478525 EPHA8P29322 1005 aaPredicted RBP2.53□□□□□ -2
HPS3-205ENST00000478525 ICAM3P32942 547 aa2.53□□□□□ -2
HPS3-205ENST00000478525 RARSP54136 660 aaKnown RBP2.53□□□□□ -2
HPS3-205ENST00000478525 TAF13Q15543 124 aa2.53□□□□□ -2
HPS3-205ENST00000478525 ADIPOQQ15848 244 aa2.53□□□□□ -2
HPS3-205ENST00000478525 C15orf32Q32M92 178 aa2.53□□□□□ -2
HPS3-205ENST00000478525 DPCR1Q3MIW9 517 aa2.53□□□□□ -2
HPS3-205ENST00000478525 HIGD2BQ4VC39 106 aa2.53□□□□□ -2
HPS3-205ENST00000478525 TSPAN33Q86UF1 283 aa2.53□□□□□ -2
HPS3-205ENST00000478525 TICAM1Q8IUC6 712 aa2.53□□□□□ -2
HPS3-205ENST00000478525 CNTROBQ8N137 903 aa2.53□□□□□ -2
HPS3-205ENST00000478525 MARVELD2Q8N4S9 558 aa2.53□□□□□ -2
HPS3-205ENST00000478525 DAZLQ92904 295 aaKnown RBP2.53□□□□□ -2
HPS3-205ENST00000478525 TRMT1Q9NXH9 659 aaKnown RBP2.53□□□□□ -2
HPS3-205ENST00000478525 SPIN1Q9Y657 262 aaPredicted RBP2.53□□□□□ -2
HPS3-205ENST00000478525 A0A1W2PRB8 838 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 TMEM8BA6NDV4 472 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 ACOD1A6NK06 481 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 MAGEC1O60732 1142 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 POLBP06746 335 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 CYP2A7P20853 494 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 HARS2P49590 506 aaKnown RBP2.52□□□□□ -2.01
HPS3-205ENST00000478525 PAX9P55771 341 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 OLR1P78380 273 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 TRPC3Q13507 836 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 TAF12Q16514 161 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 SLC9C2Q5TAH2 1124 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 RNF168Q8IYW5 571 aaPredicted RBP2.52□□□□□ -2.01
HPS3-205ENST00000478525 FGFRL1Q8N441 504 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.52□□□□□ -2.01
HPS3-205ENST00000478525 TRPC4APQ8TEL6 797 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 INTS12Q96CB8 462 aaKnown RBP2.52□□□□□ -2.01
HPS3-205ENST00000478525 GAL3ST4Q96RP7 486 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 GNB4Q9HAV0 340 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 DBNLQ9UJU6 430 aaKnown RBP2.52□□□□□ -2.01
HPS3-205ENST00000478525 HCFC1P51610 2035 aa2.52□□□□□ -2.01
HPS3-205ENST00000478525 A0A1W2PN81 502 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 C15orf61A6NNL5 157 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 MPTX1A8MV57 137 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 E9PI62 339 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 TGFB1I1O43294 461 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 PRKRAO75569 313 aaKnown RBP2.51□□□□□ -2.01
HPS3-205ENST00000478525 IPO7O95373 1038 aaKnown RBP2.51□□□□□ -2.01
HPS3-205ENST00000478525 FOLR2P14207 255 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 CA4P22748 312 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 CHRNA7P36544 502 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 LEPRP48357 1165 aaKnown RBP2.51□□□□□ -2.01
HPS3-205ENST00000478525 B3GALT5-AS1P59052 145 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 PRKCZQ05513 592 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 ZFP36L1Q07352 338 aaKnown RBP2.51□□□□□ -2.01
HPS3-205ENST00000478525 TMEM115Q12893 351 aaPredicted RBP2.51□□□□□ -2.01
HPS3-205ENST00000478525 CSTF3Q12996 717 aaKnown RBP2.51□□□□□ -2.01
HPS3-205ENST00000478525 GAGE2BQ13066 116 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 GAGE2EQ4V326 116 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 FAM109BQ6ICB4 259 aaPredicted RBP2.51□□□□□ -2.01
HPS3-205ENST00000478525 GAGE2AQ6NT46 116 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 ZNF354CQ86Y25 554 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 MARCH9Q86YJ5 346 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 MAPKAPK5-AS1Q8N8E1 139 aa2.51□□□□□ -2.01
HPS3-205ENST00000478525 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms