RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 AAR2Q9Y312 384 aaKnown RBP12.65□□□□□ -0.38
ABCF3-212ENST00000478288 ARL5AQ9Y689 179 aa12.65□□□□□ -0.38
ABCF3-212ENST00000478288 CFAP20Q9Y6A4 193 aaKnown RBP12.65□□□□□ -0.38
ABCF3-212ENST00000478288 CRYBG3Q68DQ2 2970 aa12.65□□□□□ -0.38
ABCF3-212ENST00000478288 CREBBPQ92793 2442 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 OR6C74A6NCV1 312 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 BUD23O43709 281 aaKnown RBP12.64□□□□□ -0.39
ABCF3-212ENST00000478288 DNAJB5O75953 348 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 LCA5LO95447 670 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 PBLDP30039 288 aaPredicted RBP12.64□□□□□ -0.39
ABCF3-212ENST00000478288 RORAP35398 523 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 MLLT10P55197 1068 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 XIAPP98170 497 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 GPR19Q15760 415 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 FAM199XQ6PEV8 388 aaPredicted RBP12.64□□□□□ -0.39
ABCF3-212ENST00000478288 CERS6Q6ZMG9 384 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 CCDC50Q8IVM0 306 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 DSELQ8IZU8 1212 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 ACVR1CQ8NER5 493 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 SPDYE1Q8NFV5 336 aaPredicted RBP12.64□□□□□ -0.39
ABCF3-212ENST00000478288 MR1Q95460 341 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 CALR3Q96L12 384 aaKnown RBP12.64□□□□□ -0.39
ABCF3-212ENST00000478288 RUFY1Q96T51 708 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 DPH2Q9BQC3 489 aaPredicted RBP12.64□□□□□ -0.39
ABCF3-212ENST00000478288 SLC25A23Q9BV35 468 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 FICDQ9BVA6 458 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 NLNQ9BYT8 704 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 PITPNM3Q9BZ71 974 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 ING2Q9H160 280 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 ASB8Q9H765 288 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 SOHLH2Q9NX45 425 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 PCM1Q15154 2024 aa12.64□□□□□ -0.39
ABCF3-212ENST00000478288 CCDC88CQ9P219 2028 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 IGLV3-16A0A075B6K0 115 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 AKR1B15C9JRZ8 316 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 CFAP99D6REC4 459 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 MEN1O00255 615 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 VPS4BO75351 444 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 SORBS2O94875 1100 aaKnown RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 CRTAMO95727 393 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 AGTP01019 485 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 GSTM1P09488 218 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 RBL1P28749 1068 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 PTPN7P35236 360 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 HADHAP40939 763 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 CD151P48509 253 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 MARCKSL1P49006 195 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 ZNF140P52738 457 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 RPS18P62269 152 aaKnown RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 GSTM4Q03013 218 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 TBX2Q13207 712 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 MSLNQ13421 630 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 PTPRCAPQ14761 206 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 LLGL1Q15334 1064 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 ZNF658BQ4V348 819 aaPredicted RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 ZNF789Q5FWF6 425 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 PLEKHS1Q5SXH7 462 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 CPZQ66K79 652 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 DUS1LQ6P1R4 473 aaKnown RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 DET1Q7L5Y6 550 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 SNX20Q7Z614 316 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 KLHDC8BQ8IXV7 354 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 NXPE1Q8N323 547 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 EFCAB3Q8N7B9 438 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 SLC38A9Q8NBW4 561 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 HAUS1Q96CS2 278 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 DCUN1D1Q96GG9 259 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 COPS8Q99627 209 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 CHST8Q9H2A9 424 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 TFB2MQ9H5Q4 396 aaKnown RBP12.63□□□□□ -0.39
ABCF3-212ENST00000478288 VPS37BQ9H9H4 285 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 ARNT2Q9HBZ2 717 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 ACSS2Q9NR19 701 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 FKBPLQ9UIM3 349 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 CRLS1Q9UJA2 301 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 VPS4AQ9UN37 437 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 SNX7Q9UNH6 387 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 ZNF451Q9Y4E5 1061 aa12.63□□□□□ -0.39
ABCF3-212ENST00000478288 CELSR2Q9HCU4 2923 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 TTLL8A6PVC2 850 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 F5H423 210 aaPredicted RBP12.62□□□□□ -0.39
ABCF3-212ENST00000478288 STK10O94804 968 aaKnown RBP12.62□□□□□ -0.39
ABCF3-212ENST00000478288 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
ABCF3-212ENST00000478288 ITGALP20701 1170 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 CDH3P22223 829 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 CTNNA1P35221 906 aaKnown RBP12.62□□□□□ -0.39
ABCF3-212ENST00000478288 ABRQ12979 859 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 RPA4Q13156 261 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 PRPSAP1Q14558 356 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 GSE1Q14687 1217 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 GPR33Q49SQ1 333 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 CDKL3Q8IVW4 592 aaPredicted RBP12.62□□□□□ -0.39
ABCF3-212ENST00000478288 CFAP206Q8IYR0 622 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 CCDC170Q8IYT3 715 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 TMEM102Q8N9M5 508 aaPredicted RBP12.62□□□□□ -0.39
ABCF3-212ENST00000478288 ACTL9Q8TC94 416 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 CPT1CQ8TCG5 803 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 LCN9Q8WX39 176 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 OR52A5Q9H2C5 316 aa12.62□□□□□ -0.39
ABCF3-212ENST00000478288 GOLPH3Q9H4A6 298 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms