RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 TMEM126BQ8IUX1 230 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 CCDC50Q8IVM0 306 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 CFAP206Q8IYR0 622 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 OR13C4Q8NGS5 318 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 OR8K5Q8NH50 307 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 ADAMTS17Q8TE56 1095 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 RBM41Q96IZ5 413 aaKnown RBP16.26■□□□□ 0.19
TRIM13-208ENST00000478111 NRTNQ99748 197 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 ANP32EQ9BTT0 268 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 CHST8Q9H2A9 424 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 LATS2Q9NRM7 1088 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 POMT2Q9UKY4 750 aa16.26■□□□□ 0.19
TRIM13-208ENST00000478111 SLC9B1P1A6NJY1 282 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 H7C0C1 242 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 DDX3YO15523 660 aaKnown RBP16.25■□□□□ 0.19
TRIM13-208ENST00000478111 CAPN1P07384 714 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 SLC35G4P0C7Q5 338 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 PSMB4P28070 264 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ATP5OP48047 213 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 PRLHRP49683 370 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ABRQ12979 859 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ZNF789Q5FWF6 425 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ANKRD20A2Q5SQ80 823 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ANKRD20A1Q5TYW2 823 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ANKRD20A3Q5VUR7 823 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 PAPD7Q5XG87 772 aaKnown RBP16.25■□□□□ 0.19
TRIM13-208ENST00000478111 C11orf63Q6NUN7 778 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 MICALCLQ6ZW33 695 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 DSELQ8IZU8 1212 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 TC2NQ8N9U0 490 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 OR4E2Q8NGC2 313 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ACTL9Q8TC94 416 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 MR1Q95460 341 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 LRFN5Q96NI6 719 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 TLR10Q9BXR5 811 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 PCDHGA9Q9Y5G4 932 aaKnown RBP16.25■□□□□ 0.19
TRIM13-208ENST00000478111 COLEC10Q9Y6Z7 277 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ANKRD12Q6UB98 2062 aa16.25■□□□□ 0.19
TRIM13-208ENST00000478111 ARGFXA6NJG6 315 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 MEN1O00255 615 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 PYGMP11217 842 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 NDUFS1P28331 727 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 RORAP35398 523 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 UQCRFS1P47985 274 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 ZNF140P52738 457 aaPredicted RBP16.24■□□□□ 0.19
TRIM13-208ENST00000478111 PDE1BQ01064 536 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 OTUD4Q01804 1114 aaKnown RBP16.24■□□□□ 0.19
TRIM13-208ENST00000478111 TMTC4Q5T4D3 741 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 FAM69BQ5VUD6 431 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 ITPRIPL1Q6GPH6 555 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 ARMC6Q6NXE6 501 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 ATCAYQ86WG3 371 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 KLHDC8BQ8IXV7 354 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 NXPE1Q8N323 547 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 OR1L3Q8NH93 324 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 HM13Q8TCT9 377 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 C19orf43Q9BQ61 176 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 CCM2Q9BSQ5 444 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 ING2Q9H160 280 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 OR52A5Q9H2C5 316 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 FAM96AQ9H5X1 160 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 C1GALT1Q9NS00 363 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 SOHLH2Q9NX45 425 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 PCDHA13Q9Y5I0 950 aa16.24■□□□□ 0.19
TRIM13-208ENST00000478111 IGLV3-16A0A075B6K0 115 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 C17orf113A0A1B0GUU1 675 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 BTN3A3O00478 584 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 CCL22O00626 93 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 LDB2O43679 373 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 CEACAM4O75871 244 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 RAB40ALP0C0E4 278 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 ATP1B2P14415 290 aaPredicted RBP16.23■□□□□ 0.19
TRIM13-208ENST00000478111 PRDX3P30048 256 aaKnown RBP16.23■□□□□ 0.19
TRIM13-208ENST00000478111 CTNNA1P35221 906 aaKnown RBP16.23■□□□□ 0.19
TRIM13-208ENST00000478111 PTGIRP43119 386 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 CDKN1CP49918 316 aaPredicted RBP16.23■□□□□ 0.19
TRIM13-208ENST00000478111 CCL11P51671 97 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 GSDMDP57764 484 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 COPS2P61201 443 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 TMPRSS15P98073 1019 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 GSE1Q14687 1217 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 NADK2Q4G0N4 442 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 CRYBG3Q68DQ2 2970 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 SNX20Q7Z614 316 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 ENDOVQ8N8Q3 282 aaKnown RBP16.23■□□□□ 0.19
TRIM13-208ENST00000478111 RNF214Q8ND24 703 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 ACVR1CQ8NER5 493 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 DCUN1D1Q96GG9 259 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 FAM118BQ9BPY3 351 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 SLC25A23Q9BV35 468 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 PITPNM3Q9BZ71 974 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 COG4Q9H9E3 785 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 ARNT2Q9HBZ2 717 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 PCMTD2Q9NV79 361 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 CRLS1Q9UJA2 301 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 EFR3BQ9Y2G0 817 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 AAR2Q9Y312 384 aaKnown RBP16.23■□□□□ 0.19
TRIM13-208ENST00000478111 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRIM13-208ENST00000478111 PCDHA3Q9Y5H8 950 aa16.23■□□□□ 0.19
TRIM13-208ENST00000478111 HEBP2Q9Y5Z4 205 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms