RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MS4A2Q01362 244 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ROR2Q01974 943 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 FOXM1Q08050 763 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TAF10Q12962 218 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 GPR17Q13304 367 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SQSTM1Q13501 440 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TRIM25Q14258 630 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ADRM1Q16186 407 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SPATS1Q496A3 300 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 C2orf27AQ580R0 203 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 COQ5Q5HYK3 327 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 GPR158Q5T848 1215 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 FAM171A1Q5VUB5 890 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SDHAF4Q5VUM1 108 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 FOXB2Q5VYV0 432 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CWF19L1Q69YN2 538 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 AFTPHQ6ULP2 937 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM207Q6UWW9 146 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 LARP4Q71RC2 724 aaKnown RBP eCLIP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SPATC1Q76KD6 591 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ARPINQ7Z6K5 226 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 RTN4RL1Q86UN2 441 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 AHI1Q8N157 1196 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 GALNT15Q8N3T1 639 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PTGR2Q8N8N7 351 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PDZD8Q8NEN9 1154 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 OR4L1Q8NH43 312 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 HMGCLL1Q8TB92 370 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 BLOC1S5Q8TDH9 187 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TSPEARQ8WU66 669 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ANKRD49Q8WVL7 239 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 LINC01599Q8WXQ3 324 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 NCSTNQ92542 709 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 BADQ92934 168 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 USP13Q92995 863 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ZUFSPQ96AP4 578 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PHF21BQ96EK2 531 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 C19orf60Q96EN9 201 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PLPPR2Q96GM1 343 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 DNAJC1Q96KC8 554 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TBATAQ96M53 351 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 GCNAQ96QF7 691 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TRIB3Q96RU7 358 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CYP2S1Q96SQ9 504 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 HOPXQ9BPY8 73 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 DDX50Q9BQ39 737 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 MGME1Q9BQP7 344 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CINPQ9BW66 212 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TTLL2Q9BWV7 592 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 NUSAP1Q9BXS6 441 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 MRPS26Q9BYN8 205 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TRIM4Q9C037 500 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 UNKQ9C0B0 810 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 DERL2Q9GZP9 239 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 RNF32Q9H0A6 362 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SLC6A17Q9H1V8 727 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CCDC68Q9H2F9 335 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TMPRSS5Q9H3S3 457 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF696Q9H7X3 374 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 COPS7BQ9H9Q2 264 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PDFQ9HBH1 243 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 VCX3AQ9NNX9 186 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 SPAG4Q9NPE6 437 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PFDN4Q9NQP4 134 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PAPOLBQ9NRJ5 636 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TRMT13Q9NUP7 481 aaKnown RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 NLE1Q9NVX2 485 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM161AQ9NX61 479 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 TMEM181Q9P2C4 612 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 MARCH4Q9P2E8 410 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 KLHL42Q9P2K6 505 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 UBA2Q9UBT2 640 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PACSIN3Q9UKS6 424 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PADI4Q9UM07 663 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PRG3Q9Y2Y8 225 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 NDUFAF1Q9Y375 327 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 MTF2Q9Y483 593 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-202ENST00000478050 KCTD3Q9Y597 815 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PCDHGA7Q9Y5G6 932 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CORINQ9Y5Q5 1042 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 AP4B1Q9Y6B7 739 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 CROCCQ5TZA2 2017 aa4.89□□□□□ -1.63
SF3B6-202ENST00000478050 PIKFYVEQ9Y2I7 2098 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 DYTNA2CJ06 578 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TYW5A2RUC4 315 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 LCHNA4D1U4 455 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 OR51F1A6NGY5 319 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SLC38A8A6NNN8 435 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 ENO4A6NNW6 628 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SYCE1LA8MT33 242 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 SUPT3HB4E1H0 165 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 E7ENX8 843 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 STX16-NPEPL1H3BU86 382 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 FBP2O00757 339 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 UBFD1O14562 309 aaKnown RBP4.88□□□□□ -1.63
SF3B6-202ENST00000478050 STX16O14662 325 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 KDELR3O43731 214 aa4.88□□□□□ -1.63
SF3B6-202ENST00000478050 TLR5O60602 858 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms