RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PTRH2Q9Y3E5 179 aaKnown RBP19.65■□□□□ 0.74
PDLIM1-202ENST00000477757 A0A1B0GUH1 482 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 GPR39O43194 453 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 NDST3O95803 873 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 SLC35G4P0C7Q5 338 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 ST6GAL1P15907 406 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 SSR1P43307 286 aaKnown RBP19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 LMAN1P49257 510 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 MYL5Q02045 173 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 HADHQ16836 314 aaKnown RBP19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 TMEM220Q6QAJ8 160 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 PPP1R32Q7Z5V6 425 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 NT5DC3Q86UY8 548 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 BEND7Q8N7W2 519 aaPredicted RBP19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 SPDYE1Q8NFV5 336 aaPredicted RBP19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 OR2Y1Q8NGV0 311 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 COG1Q8WTW3 980 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 LURAP1Q96LR2 239 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 CEP41Q9BYV8 373 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 SLC25A51Q9H1U9 297 aa19.64■□□□□ 0.73
PDLIM1-202ENST00000477757 NDUFS1P28331 727 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 PTGER4P35408 488 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 GJC1P36383 396 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 KLHL30Q0D2K2 578 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 ART3Q13508 389 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 PDK2Q15119 407 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 KRTAP21-3Q3LHN1 58 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 ATP13A4Q4VNC1 1196 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 GPRC6AQ5T6X5 926 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 ZDHHC20Q5W0Z9 365 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 B4GALNT4Q76KP1 1039 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 KCTD6Q8NC69 237 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 FAR1Q8WVX9 515 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 RMDN2Q96LZ7 410 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 TRAPPC9Q96Q05 1148 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 ACSL5Q9ULC5 683 aa19.63■□□□□ 0.73
PDLIM1-202ENST00000477757 NUP210LQ5VU65 1888 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 A0A1W2PQJ5 194 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 GSAPA4D1B5 854 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 KLHL33A6NCF5 533 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 MGAT4DA6NG13 374 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 MASP2O00187 686 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 MAP3K7O43318 606 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 SPAM1P38567 509 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 HIF1AQ16665 826 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 CYP2A13Q16696 494 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 LONRF2Q1L5Z9 754 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 FNBP1LQ5T0N5 605 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 FAM182AQ5T1J6 154 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 MLIPQ5VWP3 458 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 B3GNTL1Q67FW5 361 aaPredicted RBP19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 FAM151BQ6UXP7 276 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 FJX1Q86VR8 437 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 OR4E2Q8NGC2 313 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 SLX1AQ9BQ83 275 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 THAP2Q9H0W7 228 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 ATP13A2Q9NQ11 1180 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 SMOXQ9NWM0 555 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 GPN3Q9UHW5 284 aaPredicted RBP19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 KLF2Q9Y5W3 355 aaPredicted RBP19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 COLEC10Q9Y6Z7 277 aa19.62■□□□□ 0.73
PDLIM1-202ENST00000477757 UGT1A9O60656 530 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 CD63P08962 238 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 CBSLP0DN79 551 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 UGT1A6P19224 532 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 CDK11BP21127 795 aaKnown RBP19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 UGT1A1P22309 533 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 UGT1A4P22310 534 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 PRDX3P30048 256 aaKnown RBP19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 CBSP35520 551 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 AIMP2Q13155 320 aaKnown RBP19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 PPP2R5EQ16537 467 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 ZFYVE27Q5T4F4 411 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 CCDC70Q6NSX1 233 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 IGFL2Q6UWQ7 119 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 CDHR3Q6ZTQ4 885 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 MAP7D3Q8IWC1 876 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 GPR135Q8IZ08 494 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 ACVR1CQ8NER5 493 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 OR2L2Q8NH16 312 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 SPATA22Q8NHS9 363 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 AGAP3Q96P47 875 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 GBP5Q96PP8 586 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 HSD3B7Q9H2F3 369 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 SRMSQ9H3Y6 488 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 TRABDQ9H4I3 376 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 UGT1A7Q9HAW7 530 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 UGT1A10Q9HAW8 530 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 UGT1A8Q9HAW9 530 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.61■□□□□ 0.733e-8■■□□□ 14.2
PDLIM1-202ENST00000477757 HEBP2Q9Y5Z4 205 aa19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 MDC1Q14676 2089 aaKnown RBP19.61■□□□□ 0.73
PDLIM1-202ENST00000477757 ZGRF1Q86YA3 2104 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 GLYATL1P3A0A0U1RQE8 302 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 MYO1FO00160 1098 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 BTN3A1O00481 513 aa19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 GAPDHSO14556 408 aaPredicted RBP19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 CNOT3O75175 753 aaKnown RBP19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 MT-CYBP00156 380 aaPredicted RBP19.6■□□□□ 0.73
PDLIM1-202ENST00000477757 UMODP07911 640 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms