RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 DPH1Q9BZG8 443 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 TRIM31Q9BZY9 425 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 DPH5Q9H2P9 285 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 PRORYQ9H606 182 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 CASS4Q9NQ75 786 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 WASH6PQ9NQA3 447 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 POT1Q9NUX5 634 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SLC39A1Q9NY26 324 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 WHRNQ9P202 907 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 PDP2Q9P2J9 529 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 MTRF1LQ9UGC7 380 aaKnown RBP8.1□□□□□ -1.11
HDAC6-221ENST00000477561 SNX24Q9Y343 169 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 PCDHGA7Q9Y5G6 932 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 PRSS21Q9Y6M0 314 aa8.1□□□□□ -1.11
HDAC6-221ENST00000477561 ZFYVE26Q68DK2 2539 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TRBV5-4A0A0C4DH59 114 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TCRBV7S3A2A0A539 114 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 HEATR9A2RTY3 570 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 H7C0S8 307 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 SMAPO00193 183 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 CAPN5O15484 640 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-221ENST00000477561 KIF1CO43896 1103 aaKnown RBP8.09□□□□□ -1.11
HDAC6-221ENST00000477561 RASSF9O75901 435 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 ADRA1DP25100 572 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 CARSP49589 748 aaKnown RBP8.09□□□□□ -1.11
HDAC6-221ENST00000477561 PRLHRP49683 370 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TMPRSS3P57727 454 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 PPP1CAP62136 330 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 CRADDP78560 199 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 PLCL1Q15111 1095 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 DBN1Q16643 649 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TSTD2Q5T7W7 516 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TMEM164Q5U3C3 297 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 ANKS6Q68DC2 871 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 IRGCQ6NXR0 463 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 NAPRTQ6XQN6 538 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 FAM92BQ6ZTR7 304 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 CEP128Q6ZU80 1094 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 ARHGAP22Q7Z5H3 698 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 MTERF4Q7Z6M4 381 aaKnown RBP8.09□□□□□ -1.11
HDAC6-221ENST00000477561 VASH2Q86V25 355 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 PLXDC1Q8IUK5 500 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 OR13J1Q8NGT2 312 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 OR6P1Q8NGX9 317 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 AENQ8WTP8 325 aaKnown RBP8.09□□□□□ -1.11
HDAC6-221ENST00000477561 CAVIN3Q969G5 261 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 LINC00615Q96LM1 132 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-221ENST00000477561 C9orf72Q96LT7 481 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 RMDN2Q96LZ7 410 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 C12orf66Q96MD2 445 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TAAR9Q96RI9 348 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 NRTNQ99748 197 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 C19orf43Q9BQ61 176 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TSPYL1Q9H0U9 437 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 UCK1Q9HA47 277 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 APMAPQ9HDC9 416 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 CHRAC1Q9NRG0 131 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 ACSL5Q9ULC5 683 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 NFU1Q9UMS0 254 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 NEU2Q9Y3R4 380 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 TCAF1Q9Y4C2 921 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 B3GALT1Q9Y5Z6 326 aa8.09□□□□□ -1.11
HDAC6-221ENST00000477561 ZNF106Q9H2Y7 1883 aaKnown RBP8.09□□□□□ -1.12
HDAC6-221ENST00000477561 IGLV3-16A0A075B6K0 115 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 B4E171 279 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 EFSO43281 561 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 OR1I1O60431 355 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 GOT2P00505 430 aaKnown RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 C9P02748 559 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 SLC35G4P0C7Q5 338 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 LIPCP11150 499 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 MTHFD1P11586 935 aaKnown RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 ITGB6P18564 788 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 PDHA2P29803 388 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 FOXN2P32314 431 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 TSPAN7P41732 249 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 RPL21P46778 160 aaKnown RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 CAPZBP47756 277 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 PREPP48147 710 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 ARCN1P48444 511 aaKnown RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 PLTPP55058 493 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 FOXM1Q08050 763 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 GPS1Q13098 491 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 KRT33BQ14525 404 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 SEMA3AQ14563 771 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 BEND6Q5SZJ8 279 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 CACHD1Q5VU97 1274 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 CES3Q6UWW8 571 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 ZNF534Q76KX8 674 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 HDXQ7Z353 690 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 GPR155Q7Z3F1 870 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 LDB1Q86U70 411 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 RBM12BQ8IXT5 1001 aaKnown RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 BMPERQ8N8U9 685 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 PHC3Q8NDX5 983 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 PPHLN1Q8NEY8 458 aaKnown RBP8.08□□□□□ -1.12
HDAC6-221ENST00000477561 OR4L1Q8NH43 312 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 HM13Q8TCT9 377 aa8.08□□□□□ -1.12
HDAC6-221ENST00000477561 HEXDCQ8WVB3 486 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms