RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 AUTS2Q8WXX7 1259 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 IGSF21Q96ID5 467 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 GORASP1Q9BQQ3 440 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 HMG20AQ9NP66 347 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CCNB1IP1Q9NPC3 277 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 PTTG2Q9NZH5 202 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 ZNF840PA6NDX5 716 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 UGT2B11O75310 529 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 VARSP26640 1264 aaKnown RBP14.39□□□□□ -0.11
HDAC6-220ENST00000477528 SEMG2Q02383 582 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 PDCD4Q53EL6 469 aaKnown RBP14.39□□□□□ -0.11
HDAC6-220ENST00000477528 ARL10Q8N8L6 244 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 KDM1BQ8NB78 822 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 GIMAP2Q9UG22 337 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 IKZF3Q9UKT9 509 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 INSL5Q9Y5Q6 135 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 IQCF5A8MTL0 148 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 TP73O15350 636 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CBSLP0DN79 551 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CDH1P12830 882 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 SLC6A2P23975 617 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 NTSP30990 170 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CBSP35520 551 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 MCCD1P59942 119 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CDC42P60953 191 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 MERTKQ12866 999 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 KRR1Q13601 381 aaKnown RBP14.39□□□□□ -0.11
HDAC6-220ENST00000477528 TMEM214Q6NUQ4 689 aaKnown RBP14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CRTC3Q6UUV7 619 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 ERMP1Q7Z2K6 904 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 TIMMDC1Q9NPL8 285 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 IGSF5Q9NSI5 407 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 DEC1Q9P2X7 70 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 SBF2Q86WG5 1849 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 RGS5O15539 181 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 ANXA4P09525 319 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-220ENST00000477528 HNMTP50135 292 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 HMGCS1Q01581 520 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CEACAM7Q14002 265 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 CLLU1OSQ5K130 101 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 RTP2Q5QGT7 225 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 DEPDC4Q8N2C3 294 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 HM13Q8TCT9 377 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 ADAMTS6Q9UKP5 1117 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 ENTPD4Q9Y227 616 aa14.39□□□□□ -0.11
HDAC6-220ENST00000477528 HNRNPCL2B2RXH8 293 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 TMEM189-UBE2V1I3L0A0 370 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 EI24O14681 340 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 GRID2O43424 1007 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 PNLIPRP1P54315 467 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 SRSF11Q05519 484 aaKnown RBP14.38□□□□□ -0.11
HDAC6-220ENST00000477528 PHKG1Q16816 387 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 DPY19L1Q2PZI1 675 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 CCNYL2Q5T2Q4 361 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 DEPDC1Q5TB30 811 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ANKRD46Q86W74 232 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 GALNT15Q8N3T1 639 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 CLDN19Q8N6F1 224 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 TRPV3Q8NET8 790 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ZUFSPQ96AP4 578 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ERLEC1Q96DZ1 483 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 SLC29A3Q9BZD2 475 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 SLC32A1Q9H598 525 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 DOLKQ9UPQ8 538 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 GLDCP23378 1020 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 EMX2Q04743 252 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 TPRG1Q6ZUI0 275 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ZNF382Q96SR6 550 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 FAIM2Q9BWQ8 316 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 MAGEE1Q9HCI5 957 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 DNAJB9Q9UBS3 223 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 DHRS7Q9Y394 339 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 KPNA4O00629 521 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ERN1O75460 977 aaKnown RBP14.38□□□□□ -0.11
HDAC6-220ENST00000477528 NPPAP01160 153 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 FYNP06241 537 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 SLC35G4P0C7Q5 338 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 IGFBP5P24593 272 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ECT2LQ008S8 904 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 CAP1Q01518 475 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ATP1A4Q13733 1029 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 NCF4Q15080 339 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 CYP4V2Q6ZWL3 525 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-220ENST00000477528 LRRC70Q7Z2Q7 622 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 CNTN4Q8IWV2 1026 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 PAIP2BQ9ULR5 123 aaKnown RBP14.38□□□□□ -0.11
HDAC6-220ENST00000477528 RUVBL1Q9Y265 456 aaKnown RBP14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ABHD14A-ACY1A0A1B0GW23 586 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ACADMP11310 421 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 MYLK3Q32MK0 819 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 LDLRAP1Q5SW96 308 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 MED27Q6P2C8 311 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ISCA2Q86U28 154 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 ZFP28Q8NHY6 868 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 L3HYPDHQ96EM0 354 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 CEP295NLQ96MC4 621 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 TCF25Q9BQ70 676 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 TREX1Q9NSU2 369 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 OAZ3Q9UMX2 235 aa14.38□□□□□ -0.11
HDAC6-220ENST00000477528 PCDHGA11Q9Y5H2 935 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms