RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	ABCB1	P08183	1280 aa	Predicted RBP	3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	KRT20	P35900	424 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	PNRC1	Q12796	327 aa	Predicted RBP	3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	KIR2DS3	Q14952	304 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	C19orf48	Q6RUI8	117 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	ANO5	Q75V66	913 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	PRPF39	Q86UA1	669 aa	Known RBP	3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	FAM114A1	Q8IWE2	563 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	ZNF354B	Q96LW1	612 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	DGAT2	Q96PD7	388 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	NEK1	Q96PY6	1258 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	OLFM1	Q99784	485 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	CCDC106	Q9BWC9	280 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	GOLPH3L	Q9H4A5	285 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	TFB2M	Q9H5Q4	396 aa	Known RBP	3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	TBC1D17	Q9HA65	648 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	APOBEC3G	Q9HC16	384 aa	Known RBP	3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	CRNN	Q9UBG3	495 aa	Predicted RBP	3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	MORF4L1	Q9UBU8	362 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	3.99	□□□□□ -1.77	4e-18	■■■■□ 21.5
RBM39-231	ENST00000477334	TRPV2	Q9Y5S1	764 aa		3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	TCF20	Q9UGU0	1960 aa	Known RBP	3.99	□□□□□ -1.77
RBM39-231	ENST00000477334	ELOVL7	A1L3X0	281 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	FAM172BP	A6NC97	362 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	IPO8	O15397	1037 aa	Known RBP	3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	IL11	P20809	199 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	THOP1	P52888	689 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	PHEX	P78562	749 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	CDK3	Q00526	305 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	KCTD2	Q14681	263 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	SNAPC1	Q16533	368 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	TMEM266	Q2M3C6	531 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	NAA16	Q6N069	864 aa	Predicted RBP	3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	TRMT1L	Q7Z2T5	733 aa	Known RBP	3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	CUZD1	Q86UP6	607 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	TMEM173	Q86WV6	379 aa	Predicted RBP	3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	L3MBTL4	Q8NA19	623 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	POGLUT1	Q8NBL1	392 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	ZNF473	Q8WTR7	871 aa	Known RBP	3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	SCRN2	Q96FV2	425 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	PSD2	Q9BQI7	771 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	MOV10L1	Q9BXT6	1211 aa	Known RBP	3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	DPAGT1	Q9H3H5	408 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	PELI2	Q9HAT8	420 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	ZNF334	Q9HCZ1	680 aa	Predicted RBP	3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	FAM118A	Q9NWS6	357 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	NKIRAS2	Q9NYR9	191 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	GDE1	Q9NZC3	331 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	TTLL3	Q9Y4R7	772 aa		3.98	□□□□□ -1.77
RBM39-231	ENST00000477334	ZNF541	Q9H0D2	1346 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	ANKUB1	A6NFN9	424 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	SLC22A3	O75751	556 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	NR3C1	P04150	777 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	UMOD	P07911	640 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	MSH3	P20585	1137 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	KRTAP5-9	P26371	169 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	EPHA2	P29317	976 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	RPS18	P62269	152 aa	Known RBP	3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	CALD1	Q05682	793 aa	Known RBP	3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	MFAP5	Q13361	173 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	PRPF4B	Q13523	1007 aa	Known RBP	3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	C6orf163	Q5TEZ5	329 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	TICAM2	Q86XR7	235 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	ZNF595	Q8IYB9	648 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	OR8H2	Q8N162	312 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	LSMEM1	Q8N8F7	131 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	POMGNT2	Q8NAT1	580 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	KCTD6	Q8NC69	237 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	OR5M8	Q8NGP6	311 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	CFAP61	Q8NHU2	1237 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	SECISBP2L	Q93073	1101 aa	Known RBP	3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	NXNL1	Q96CM4	212 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	STAMBPL1	Q96FJ0	436 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	MS4A10	Q96PG2	267 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	UHRF2	Q96PU4	802 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	TRAF4	Q9BUZ4	470 aa	Predicted RBP	3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	VPS33B	Q9H267	617 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	OLFML3	Q9NRN5	406 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	TAB2	Q9NYJ8	693 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	HAO2	Q9NYQ3	351 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334	CLIC5	Q9NZA1	410 aa		3.97	□□□□□ -1.77
RBM39-231	ENST00000477334		A0A0B4J293	547 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	MED19	A0JLT2	244 aa	Predicted RBP	3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	SYNDIG1L	A6NDD5	238 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	PRKN	O60260	465 aa	Predicted RBP	3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	TSPAN1	O60635	241 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	MED24	O75448	989 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	PSMD10	O75832	226 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	DNTT	P04053	509 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	TPD52	P55327	224 aa	Predicted RBP	3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	LINC01547	P58512	204 aa	Predicted RBP	3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	UBXN2A	P68543	259 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	DMP1	Q13316	513 aa	Predicted RBP	3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	IL11RA	Q14626	422 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	NR1D2	Q14995	579 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	LETM2	Q2VYF4	491 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	CBWD6	Q4V339	395 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	WDR38	Q5JTN6	314 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	CBWD3	Q5JTY5	395 aa		3.96	□□□□□ -1.78
RBM39-231	ENST00000477334	CCNYL2	Q5T2Q4	361 aa		3.96	□□□□□ -1.78

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