RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SLA2Q9H6Q3 261 aa15.03■□□□□ -0
CLSTN1-205ENST00000477264 SLCO3A1Q9UIG8 710 aa15.03■□□□□ -0
CLSTN1-205ENST00000477264 DNAH12Q6ZR08 3092 aa15.03■□□□□ -0
CLSTN1-205ENST00000477264 PNMA8CA0A1B0GUJ8 204 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 SLC7A4O43246 635 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 RGS10O43665 173 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 F9P00740 461 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 CTSHP09668 335 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 CD1DP15813 335 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 LSM3P62310 102 aaKnown RBP15.02■□□□□ -0
CLSTN1-205ENST00000477264 GPR158Q5T848 1215 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 SPESP1Q6UW49 350 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 SPATA22Q8NHS9 363 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 ALOXE3Q9BYJ1 711 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 GABARAPL1Q9H0R8 117 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 CNGB3Q9NQW8 809 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 QPCTLQ9NXS2 382 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 ERVK-18Q9QC07 812 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 RAPGEFL1Q9UHV5 662 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 MAGED1Q9Y5V3 778 aaPredicted RBP15.02■□□□□ -0
CLSTN1-205ENST00000477264 FRMPD3Q5JV73 1810 aa15.02■□□□□ -0
CLSTN1-205ENST00000477264 PRMT5O14744 637 aaPredicted RBP15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 FKBP9O95302 570 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 MED26O95402 600 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 TRAPPC2P0DI81 140 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 TRAPPC2BP0DI82 140 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 PRKCAP17252 672 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 IL1RNP18510 177 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 MSH3P20585 1137 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 S100A5P33763 92 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 TGFBR2P37173 567 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 THPOP40225 353 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 FOXA1P55317 472 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 COLEC12Q5KU26 742 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 SIGIRRQ6IA17 410 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 CAPN13Q6MZZ7 669 aaPredicted RBP15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 CCBE1Q6UXH8 406 aaPredicted RBP15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 B3GNT8Q7Z7M8 397 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 CILP2Q8IUL8 1156 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 ATPAF2Q8N5M1 289 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 OR6F1Q8NGZ6 308 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 PTERQ96BW5 349 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 ZNF560Q96MR9 790 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 TFB2MQ9H5Q4 396 aaKnown RBP15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 ACTR8Q9H981 624 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 ACOT13Q9NPJ3 140 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 POLR3BQ9NW08 1133 aaPredicted RBP15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 USP22Q9UPT9 525 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 BTRCQ9Y297 605 aa15.02□□□□□ -0.01
CLSTN1-205ENST00000477264 ZBBXA8MT70 800 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 PDZK1P1A8MUH7 402 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 FAM25AB3EWG3 89 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 FAM25CB3EWG5 89 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 FAM25GB3EWG6 89 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 GSTA4O15217 222 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 NOBOXO60393 691 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 SCELO95171 688 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 PCNAP12004 261 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 NPR3P17342 541 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 FDXRP22570 491 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 CASP2P42575 452 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 MASP1P48740 699 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 UFM1P61960 85 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 MRPS15P82914 257 aaKnown RBP15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 PWP1Q13610 501 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 VARS2Q5ST30 1063 aaKnown RBP15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 SYPL2Q5VXT5 272 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 IL17RDQ8NFM7 739 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 KBTBD8Q8NFY9 601 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 SLC38A4Q969I6 547 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 SH3GL1Q99961 368 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 MFSD1Q9H3U5 465 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 SMOC2Q9H3U7 446 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 ARNT2Q9HBZ2 717 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 STARD7Q9NQZ5 370 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 SNTG2Q9NY99 539 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 MKLN1Q9UL63 735 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 PCDHGA3Q9Y5H0 932 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 N6AMT1Q9Y5N5 214 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 LOC110117498-PIK3R3F6TDL0 507 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 GABRDO14764 452 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 ZW10O43264 779 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 XPNPEP2O43895 674 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 MT-CYBP00156 380 aaPredicted RBP15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 MT-ND2P03891 347 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 UROSP10746 265 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 CD6P30203 668 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 DDOSTP39656 456 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 DCTP40126 519 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 ETV6P41212 452 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 CLK1P49759 484 aaKnown RBP15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 SUOXP51687 545 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 C19orf57Q0VDD7 668 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 ZFP69Q49AA0 526 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 ATAD3CQ5T2N8 411 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 UBE2UQ5VVX9 321 aa15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 TWF2Q6IBS0 349 aaKnown RBP15.01□□□□□ -0.01
CLSTN1-205ENST00000477264 TIGD7Q6NT04 549 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms