RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 C9orf72Q96LT7 481 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 FERMT1Q9BQL6 677 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 TIMM29Q9BSF4 260 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 TRIM7Q9C029 511 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 THAP2Q9H0W7 228 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 DEF6Q9H4E7 631 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 KLC4Q9NSK0 619 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 ETNK2Q9NVF9 386 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 NFKBIL1Q9UBC1 381 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-214ENST00000477152 TBC1D29Q9UFV1 150 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 KCNK6Q9Y257 313 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.14□□□□□ -1.277e-6■■□□□ 12.1
BRCA1-214ENST00000477152 RPS6KL1Q9Y6S9 549 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 AHCTF1Q8WYP5 2266 aa7.14□□□□□ -1.27
BRCA1-214ENST00000477152 MN1Q10571 1320 aaPredicted RBP7.14□□□□□ -1.27
BRCA1-214ENST00000477152 PDZK1P1A8MUH7 402 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF487B1APH4 448 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 C21orf140B9A014 251 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 MTSS1O43312 755 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 MFSD11O43934 449 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 SOD1P00441 154 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ATP1A1P05023 1023 aaKnown RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PRKAR1AP10644 381 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 GJC1P36383 396 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 DLSTP36957 453 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 CD86P42081 329 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 STAT5AP42229 794 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 NFKB2Q00653 900 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 DPYSL3Q14195 570 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 NR1I3Q14994 352 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 DEFB109BQ30KR1 87 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 COLEC12Q5KU26 742 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 NCBP2-AS2Q69YL0 99 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 WASH2PQ6VEQ5 465 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 TMEM26Q6ZUK4 368 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZAR1Q86SH2 424 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 TRIM74Q86UV6 250 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 NT5DC3Q86UY8 548 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PPP1R3BQ86XI6 285 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 TP53INP2Q8IXH6 220 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 LRRC45Q96CN5 670 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 TRABDQ9H4I3 376 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 WASH6PQ9NQA3 447 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 TPSG1Q9NRR2 321 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PADI1Q9ULC6 663 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PLEKHM1Q9Y4G2 1056 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 LOC101059948A0A1B0GTJ6 334 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PYCARD-AS1I3L0S3 204 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 KLHL41O60662 606 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 RFPL1O75677 317 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PROSCO94903 275 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 NDUFA10O95299 355 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 JCHAINP01591 159 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 C9P02748 559 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PYGMP11217 842 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF7P17097 686 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 CASP14P31944 242 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ARHGAP25P42331 645 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 GATA4P43694 442 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 UBASH3AP57075 661 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 RPS15P62841 145 aaKnown RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 IFI35P80217 286 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ACY1Q03154 408 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PPIDQ08752 370 aaKnown RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 AP1B1Q10567 949 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 TMTC4Q5T4D3 741 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 AGAP9Q5VTM2 703 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ARMC6Q6NXE6 501 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PRSS42Q7Z5A4 293 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF761Q86XN6 746 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 KMT5CQ86Y97 462 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 HPS6Q86YV9 775 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 GDAP1Q8TB36 358 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 GLYATL1Q969I3 302 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF514Q96K75 400 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PLEKHG4BQ96PX9 1271 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 CD180Q99467 661 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 CTRCQ99895 268 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 GPR87Q9BY21 358 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 RAB33BQ9H082 229 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 OR2AG1Q9H205 316 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF768Q9H5H4 540 aaKnown RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 PRDM8Q9NQV8 689 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 DDX56Q9NY93 547 aaKnown RBP7.13□□□□□ -1.27
BRCA1-214ENST00000477152 HACD3Q9P035 362 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 TMEM9Q9P0T7 183 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ANKMY1Q9P2S6 941 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ATXN10Q9UBB4 475 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 RARRES3Q9UL19 164 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 CAPN11Q9UMQ6 739 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 MYO18BQ8IUG5 2567 aa7.13□□□□□ -1.27
BRCA1-214ENST00000477152 ZNF106Q9H2Y7 1883 aaKnown RBP7.12□□□□□ -1.27
BRCA1-214ENST00000477152 KALRNO60229 2985 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 APOL1O14791 398 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 NKX2-8O15522 239 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 VPS4BO75351 444 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 KATNA1O75449 491 aa7.12□□□□□ -1.27
BRCA1-214ENST00000477152 CDK14O94921 469 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms