RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 RWDD2AQ9UIY3 292 aa14.85□□□□□ -0.03
SMG5-204ENST00000476954 TTLL3Q9Y4R7 772 aa14.85□□□□□ -0.03
SMG5-204ENST00000476954 INTS1Q8N201 2190 aaKnown RBP14.84□□□□□ -0.03
SMG5-204ENST00000476954 SOCS6O14544 535 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 VEGFDO43915 354 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 ESRRAP11474 423 aaPredicted RBP14.84□□□□□ -0.03
SMG5-204ENST00000476954 VCLP18206 1134 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 AGAP20933 346 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 PSMA2P25787 234 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 HCAR3P49019 387 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 SMSP52788 366 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 CDH6P55285 790 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 MFAP5Q13361 173 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 XRCC4Q13426 336 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 VWA3BQ502W6 1294 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 HSP90AA4PQ58FG1 418 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 FAM182AQ5T1J6 154 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 IRAK1BP1Q5VVH5 260 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 TMCO3Q6UWJ1 677 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 ISLR2Q6UXK2 745 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 CARFQ8N187 725 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 SPDYE1Q8NFV5 336 aaPredicted RBP14.84□□□□□ -0.03
SMG5-204ENST00000476954 OR4E2Q8NGC2 313 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 THOC3Q96J01 351 aaKnown RBP14.84□□□□□ -0.03
SMG5-204ENST00000476954 POLR1EQ9GZS1 481 aaKnown RBP14.84□□□□□ -0.03
SMG5-204ENST00000476954 LHPPQ9H008 270 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 DLL4Q9NR61 685 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 C1GALT1Q9NS00 363 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 SLC22A11Q9NSA0 550 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 SHOC2Q9UQ13 582 aa14.84□□□□□ -0.03
SMG5-204ENST00000476954 RPH3AQ9Y2J0 694 aaPredicted RBP14.84□□□□□ -0.03
SMG5-204ENST00000476954 KIAA1324LA8MWY0 1029 aaPredicted RBP14.83□□□□□ -0.04
SMG5-204ENST00000476954 POP7O75817 140 aaKnown RBP14.83□□□□□ -0.04
SMG5-204ENST00000476954 F10P00742 488 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 HBQ1P09105 142 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 PRKCSHP14314 528 aaPredicted RBP14.83□□□□□ -0.04
SMG5-204ENST00000476954 HLA-DPA1P20036 260 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 MIPP30301 263 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 CTSCP53634 463 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 PPP2R2AP63151 447 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 DCDP81605 110 aaKnown RBP14.83□□□□□ -0.04
SMG5-204ENST00000476954 TMEM115Q12893 351 aaPredicted RBP14.83□□□□□ -0.04
SMG5-204ENST00000476954 DEFB110Q30KQ9 67 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 ALG1LQ6GMV1 187 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 LRRN4Q8WUT4 740 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 TREX2Q9BQ50 279 aaPredicted RBP14.83□□□□□ -0.04
SMG5-204ENST00000476954 C17orf62Q9BQA9 187 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 TRIM7Q9C029 511 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 WWP1Q9H0M0 922 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 GANQ9H2C0 597 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 DEF6Q9H4E7 631 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 SYTL2Q9HCH5 934 aa14.83□□□□□ -0.04
SMG5-204ENST00000476954 GSAPA4D1B5 854 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 ANKRD66B4E2M5 251 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 H3BMH7 237 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 FANCGO15287 622 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 SLC19A2O60779 497 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 MSL3P1P0C860 447 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 PBLDP30039 288 aaPredicted RBP14.82□□□□□ -0.04
SMG5-204ENST00000476954 PRDX3P30048 256 aaKnown RBP14.82□□□□□ -0.04
SMG5-204ENST00000476954 KLK7P49862 253 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 RPL26P61254 145 aaKnown RBP14.82□□□□□ -0.04
SMG5-204ENST00000476954 NKAIN1Q4KMZ8 207 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 KIRREL2Q6UWL6 708 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 AMZ2Q86W34 360 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 HSCBQ8IWL3 235 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 C12orf66Q96MD2 445 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 SMR3AQ99954 134 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 CXXC4Q9H2H0 198 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 ZFYVE1Q9HBF4 777 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 FAM60AQ9NP50 221 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 SAMSN1Q9NSI8 373 aaKnown RBP14.82□□□□□ -0.04
SMG5-204ENST00000476954 SEPT11Q9NVA2 429 aaKnown RBP14.82□□□□□ -0.04
SMG5-204ENST00000476954 TNFRSF10DQ9UBN6 386 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 CDC23Q9UJX2 597 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 RPL26L1Q9UNX3 145 aaKnown RBP14.82□□□□□ -0.04
SMG5-204ENST00000476954 HS3ST3B1Q9Y662 390 aa14.82□□□□□ -0.04
SMG5-204ENST00000476954 SNRNP200O75643 2136 aaKnown RBP14.81□□□□□ -0.04
SMG5-204ENST00000476954 GOLGA6L4A6NEF3 574 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 H3BRJ5 948 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 BTN3A3O00478 584 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 OR2B3O76000 313 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 MMP11P24347 488 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 SOX5P35711 763 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 DCDC1P59894 354 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 ARG2P78540 354 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 TMPRSS15P98073 1019 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 PMP22Q01453 160 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 DMPKQ09013 629 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 SKOR2Q2VWA4 1001 aaPredicted RBP14.81□□□□□ -0.04
SMG5-204ENST00000476954 RHBDD2Q6NTF9 364 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 SHISA6Q6ZSJ9 500 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 TAOK1Q7L7X3 1001 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 PRIMA1Q86XR5 153 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 RASGEF1AQ8N9B8 481 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 GDAP1Q8TB36 358 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 NAT14Q8WUY8 206 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 CPLX3Q8WVH0 158 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 LMF1Q96S06 567 aa14.81□□□□□ -0.04
SMG5-204ENST00000476954 PITPNM3Q9BZ71 974 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms