RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 MOSPD3O75425 235 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 H6PDO95479 791 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 CKMT2P17540 419 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 ARL1P40616 181 aaPredicted RBP16.18■□□□□ 0.18
TMEM53-208ENST00000476724 FXNQ16595 210 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 NADK2Q4G0N4 442 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 ZNF697Q5TEC3 545 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 NANOGP8Q6NSW7 305 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 FAM151BQ6UXP7 276 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 GALNT13Q8IUC8 556 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 ALDH16A1Q8IZ83 802 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 SFRP1Q8N474 314 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 PAPD5Q8NDF8 572 aaKnown RBP16.18■□□□□ 0.18
TMEM53-208ENST00000476724 OR4F6Q8NGB9 312 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 TFAP2CQ92754 450 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 PPP3R2Q96LZ3 170 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 C1orf50Q9BV19 199 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 TM6SF2Q9BZW4 377 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 NANOGQ9H9S0 305 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 THEGQ9P2T0 379 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 CCL26Q9Y258 94 aa16.18■□□□□ 0.18
TMEM53-208ENST00000476724 A0A0U1RQS6 177 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 C1orf232A0A0U1RR37 186 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 LEFTY2O00292 366 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 GAPDHSO14556 408 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 OR7A17O14581 309 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 ACRV1P26436 265 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 HMOX2P30519 316 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 NTHL1P78549 312 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 LSAMPQ13449 338 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 SHHQ15465 462 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 CYP51A1Q16850 503 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 TMTC4Q5T4D3 741 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 GRAMD4Q6IC98 578 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 MACC1Q6ZN28 852 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 MILR1Q7Z6M3 343 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 TBC1D21Q8IYX1 336 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 CPXM2Q8N436 756 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 CDK15Q96Q40 435 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 IPPKQ9H8X2 491 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 CERS4Q9HA82 394 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 EVLQ9UI08 416 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 MYRFQ9Y2G1 1151 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 MYOFQ9NZM1 2061 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 ZNF106Q9H2Y7 1883 aaKnown RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 K7ERQ8 282 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 SOCS2O14508 198 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 SLC25A14O95258 325 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 ATP6V1B1P15313 513 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 IL12AP29459 219 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 CCT8P50990 548 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 MAD2L1Q13257 205 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 MAP7Q14244 749 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 TEAD2Q15562 447 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 CDKN3Q16667 212 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 RABL3Q5HYI8 236 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 SULT1C3Q6IMI6 304 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 HTR3DQ70Z44 454 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 RBM23Q86U06 439 aaKnown RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 KIAA2013Q8IYS2 634 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 APCDD1Q8J025 514 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 PAF1Q8N7H5 531 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 TSPAN14Q8NG11 270 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 HM13Q8TCT9 377 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 ATP13A3Q9H7F0 1226 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 IL26Q9NPH9 171 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 LATS2Q9NRM7 1088 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 PTTG2Q9NZH5 202 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 KIAA1522Q9P206 1035 aaPredicted RBP16.17■□□□□ 0.18
TMEM53-208ENST00000476724 DMTF1Q9Y222 760 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 SH3BP1Q9Y3L3 701 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 AK5Q9Y6K8 562 aa16.17■□□□□ 0.18
TMEM53-208ENST00000476724 GLYATL1P3A0A0U1RQE8 302 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 TCRBV5S2A0A599 114 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 H3BNH8 94 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 LSM1O15116 133 aaKnown RBP16.16■□□□□ 0.18
TMEM53-208ENST00000476724 INPP4BO15327 924 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 GPR39O43194 453 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 OR6B1O95007 311 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 IGSF6O95976 241 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 RHOP08100 348 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 TUBA4AP68366 448 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 TRAF3Q13114 568 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 FUT11Q495W5 492 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 TIGD2Q4W5G0 525 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 MPPE1Q53F39 396 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 CYP20A1Q6UW02 462 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 RBM44Q6ZP01 1051 aaKnown RBP16.16■□□□□ 0.18
TMEM53-208ENST00000476724 ADGRD2Q7Z7M1 963 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 IFNEQ86WN2 208 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 ZBTB2Q8N680 514 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 METTL25Q8N6Q8 603 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 GRIP2Q9C0E4 1043 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 RDH14Q9HBH5 336 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 ABCB8Q9NUT2 735 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 ANAPC2Q9UJX6 822 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 CLEC4EQ9ULY5 219 aa16.16■□□□□ 0.18
TMEM53-208ENST00000476724 YBX2Q9Y2T7 364 aaKnown RBP16.16■□□□□ 0.18
TMEM53-208ENST00000476724 SLC28A1O00337 649 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms