RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 ILKAPQ9H0C8 392 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 TTYH1Q9H313 450 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 RIMS4Q9H426 269 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 CCDC86Q9H6F5 360 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 COQ10BQ9H8M1 238 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 LRRC40Q9H9A6 602 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ERVK-5Q9HDB9 667 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NIT2Q9NQR4 276 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 PAK6Q9NQU5 681 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 AGPAT3Q9NRZ7 376 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 C19orf12Q9NSK7 152 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 TMOD3Q9NYL9 352 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 TAS2R9Q9NYW1 312 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 GDE1Q9NZC3 331 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NINJ2Q9NZG7 142 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NDRG3Q9UGV2 375 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MLXQ9UH92 298 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 SLCO3A1Q9UIG8 710 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ELF5Q9UKW6 265 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 PRPF19Q9UMS4 504 aaKnown RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 NAALAD2Q9Y3Q0 740 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 SESN1Q9Y6P5 492 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 NEXMIFQ5QGS0 1516 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 ZNF142P52746 1687 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 SCN4AP35499 1836 aa4.1□□□□□ -1.75
CD55-208ENST00000476590 MED1Q15648 1581 aaPredicted RBP4.1□□□□□ -1.75
CD55-208ENST00000476590 DDX60Q8IY21 1712 aaKnown RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 FAM237BA0A1B0GVD1 139 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 PIPSLA2A3N6 862 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 OR6C70A6NIJ9 312 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 TMEM210A6NLX4 147 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 UPK3BL1B0FP48 263 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 WDR64B1ANS9 1081 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 KRBOX1C9JBD0 128 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 E5RI56 91 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 UPK3BL2E5RIL1 263 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 H7C0S8 307 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 M0R3G1 203 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 SLC30A4O14863 429 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 KLF11O14901 512 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 KHNYNO15037 678 aaKnown RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 PQBP1O60828 265 aaKnown RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 PRKRAO75569 313 aaKnown RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 POP7O75817 140 aaKnown RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 TDP2O95551 362 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 C1QBP02746 253 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 STSP08842 583 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 QDPRP09417 244 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ZDHHC11BP0C7U3 371 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ZNF8P17098 575 aaPredicted RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 NFKB1P19838 968 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ADRA1DP25100 572 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 LAP3P28838 519 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 SLC1A3P43003 542 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 MAP2K3P46734 347 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 CASP4P49662 377 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 DIO1P49895 249 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 SERPINB9P50453 376 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 CLCN5P51795 746 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 CDH6P55285 790 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 NME5P56597 212 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 HERVK_113P63132 956 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ASIC1P78348 528 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 MRPS22P82650 360 aaKnown RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 HSF2Q03933 536 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 MTM1Q13496 603 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 AQP6Q13520 282 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 GPR50Q13585 617 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 FGL2Q14314 439 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 STARD3Q14849 445 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ANGPT1Q15389 498 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 CALCRLQ16602 461 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 BMT2Q1RMZ1 405 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 CLEC16AQ2KHT3 1053 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 KIF19Q2TAC6 998 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 NHSL2Q5HYW2 709 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ADGRF1Q5T601 910 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 TIGD7Q6NT04 549 aaPredicted RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 SLC27A4Q6P1M0 643 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 RHBDF2Q6PJF5 856 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ZNF773Q6PK81 442 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ZNF517Q6ZMY9 492 aaPredicted RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 PDZD4Q76G19 769 aaPredicted RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 CHST15Q7LFX5 561 aaPredicted RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 OTOP1Q7RTM1 612 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 LUZP2Q86TE4 346 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 NLRP8Q86W28 1048 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 EPHX4Q8IUS5 362 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 DEFB107AQ8IZN7 70 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 LGI2Q8N0V4 545 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 ZNF619Q8N2I2 560 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 PACRGLQ8N7B6 248 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 MFSD2AQ8NA29 543 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 AGBL3Q8NEM8 1001 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 OR6M1Q8NGM8 313 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 CLHC1Q8NHS4 586 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 EDARADDQ8WWZ3 215 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 CENPIQ92674 756 aaPredicted RBP4.09□□□□□ -1.75
CD55-208ENST00000476590 RFKQ969G6 155 aa4.09□□□□□ -1.75
CD55-208ENST00000476590 NTAN1Q96AB6 310 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms