RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 TSPAN1O60635 241 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 BMP10O95393 424 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 TKTP29401 623 aaKnown RBP5.68□□□□□ -1.5
VPS50-212ENST00000476413 HTR6P50406 440 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 ZBTB17Q13105 803 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 MPP7Q5T2T1 576 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 OR7E24Q6IFN5 339 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 TMPRSS11FQ6ZWK6 438 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 SLC4A11Q8NBS3 891 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 SCARB1Q8WTV0 552 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 DEPDC1BQ8WUY9 529 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 ATL1Q8WXF7 558 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 DAZLQ92904 295 aaKnown RBP5.68□□□□□ -1.5
VPS50-212ENST00000476413 SLAMF9Q96A28 289 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 CDCA5Q96FF9 252 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 ADGRG7Q96K78 797 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 ZNF558Q96NG5 402 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 FZD8Q9H461 694 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 EBF2Q9HAK2 575 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 LRRC4Q9HBW1 653 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 RALYQ9UKM9 306 aaKnown RBP5.68□□□□□ -1.5
VPS50-212ENST00000476413 GTF3C4Q9UKN8 822 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 VDAC3Q9Y277 283 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 CGNL1Q0VF96 1302 aa5.68□□□□□ -1.5
VPS50-212ENST00000476413 ALPLP05186 524 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 ATP5BP06576 529 aaKnown RBP5.67□□□□□ -1.5
VPS50-212ENST00000476413 NGFRP08138 427 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 MUTP22033 750 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 MTHFRP42898 656 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 ZNF75DP51815 510 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 PLA2G7Q13093 441 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 SNTA1Q13424 505 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 STXBP5Q5T5C0 1151 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 ZBTB49Q6ZSB9 765 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 KMT5CQ86Y97 462 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 PTOV1Q86YD1 416 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS50-212ENST00000476413 IQUBQ8NA54 791 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 OR5M8Q8NGP6 311 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 LNX1Q8TBB1 728 aaPredicted RBP5.67□□□□□ -1.5
VPS50-212ENST00000476413 ROBO4Q8WZ75 1007 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 SPSB1Q96BD6 273 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 BICD1Q96G01 975 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 JAKMIP1Q96N16 626 aaKnown RBP5.67□□□□□ -1.5
VPS50-212ENST00000476413 GBP5Q96PP8 586 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 SPAG5Q96R06 1193 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 MGME1Q9BQP7 344 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 NEURL2Q9BR09 285 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 BTBD10Q9BSF8 475 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 LMF2Q9BU23 707 aaKnown RBP5.67□□□□□ -1.5
VPS50-212ENST00000476413 UBTD1Q9HAC8 227 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 GRPEL1Q9HAV7 217 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 Q9N2K0 584 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 PFDN4Q9NQP4 134 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 DNAJB9Q9UBS3 223 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 RNF150Q9ULK6 438 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 ABT1Q9ULW3 272 aaKnown RBP5.67□□□□□ -1.5
VPS50-212ENST00000476413 GRIP1Q9Y3R0 1128 aa5.67□□□□□ -1.5
VPS50-212ENST00000476413 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS50-212ENST00000476413 ELOVL7A1L3X0 281 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 ANXA2P2A6NMY6 339 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 HNRNPCL2B2RXH8 293 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 ZBTB11O95625 1053 aaPredicted RBP5.66□□□□□ -1.5
VPS50-212ENST00000476413 CDH1P12830 882 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 CCKBRP32239 447 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 HSPA4P34932 840 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 GNL1P36915 607 aaPredicted RBP5.66□□□□□ -1.5
VPS50-212ENST00000476413 AMPHP49418 695 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 DSCR9P59020 149 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 POLR2LP62875 67 aaKnown RBP5.66□□□□□ -1.5
VPS50-212ENST00000476413 C6orf136Q5SQH8 315 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 KRT39Q6A163 491 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 PRR27Q6MZM9 219 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 KLC3Q6P597 504 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 SHQ1Q6PI26 577 aaKnown RBP5.66□□□□□ -1.5
VPS50-212ENST00000476413 LINGO4Q6UY18 593 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 PLEKHM3Q6ZWE6 761 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 CREB3L2Q70SY1 520 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.66□□□□□ -1.5
VPS50-212ENST00000476413 TMPRSS11BQ86T26 416 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 FAM114A1Q8IWE2 563 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 EXT2Q93063 718 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 FAM162AQ96A26 154 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 OXNAD1Q96HP4 312 aaPredicted RBP5.66□□□□□ -1.5
VPS50-212ENST00000476413 FEVQ99581 238 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 SEPHS2Q99611 448 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 DESI2Q9BSY9 194 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 DPP3Q9NY33 737 aa5.66□□□□□ -1.5
VPS50-212ENST00000476413 SPIN1Q9Y657 262 aaPredicted RBP5.66□□□□□ -1.5
VPS50-212ENST00000476413 A0A087WV48 116 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 TRAV34A0A0B4J273 112 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 A0A0G2JNG1 304 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 FAM170AA1A519 330 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 MAGEA13PA6NCF6 341 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 OR6C76A6NM76 312 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 MEIS2O14770 477 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 SMAD6O43541 496 aaKnown RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 SIX3O95343 332 aaPredicted RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 WDPCPO95876 746 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 LIPFP07098 398 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms