RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FIGLAQ6QHK4 219 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF793Q6ZN11 406 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 PHLDB2Q86SQ0 1253 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF410Q86VK4 478 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 ZDHHC23Q8IYP9 409 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 CFAP206Q8IYR0 622 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 ANKRD13CQ8N6S4 541 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 HORMAD2Q8N7B1 307 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 MCPH1Q8NEM0 835 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 TBC1D16Q8TBP0 767 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 BICD2Q8TD16 824 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 WIPF2Q8TF74 440 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 ATL1Q8WXF7 558 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 THRSPQ92748 146 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 MUS81Q96NY9 551 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 NAP1L3Q99457 506 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 CPNE1Q99829 537 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 SH2D3AQ9BRG2 576 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 WDR83Q9BRX9 315 aaKnown RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 TMEM79Q9BSE2 394 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 CRACR2AQ9BSW2 395 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 THUMPD2Q9BTF0 503 aaKnown RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 CARD6Q9BX69 1037 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 VPS33BQ9H267 617 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 FANCFQ9NPI8 374 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 PNRC2Q9NPJ4 139 aaKnown RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 PDGFCQ9NRA1 345 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 RNF146Q9NTX7 359 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 TMEM45AQ9NWC5 275 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 OR6C3Q9NZP0 311 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 KLHL13Q9P2N7 655 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 SLC9A2Q9UBY0 812 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 LAMP5Q9UJQ1 280 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 SMC3Q9UQE7 1217 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 WDR37Q9Y2I8 494 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 WDR17Q8IZU2 1322 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 NESP48681 1621 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 A0A1W2PPW3 197 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 ELOVL7A1L3X0 281 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 TMEM8BA6NDV4 472 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 CFAP73A6NFT4 308 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 KBTBD13C9JR72 458 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 M0QZ24 198 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 NDUFS4O43181 175 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 SSX4O60224 188 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 GMFGO60234 142 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 PROP1O75360 226 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 TOMM70O94826 608 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 GLCEO94923 617 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 APBB3O95704 486 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 TOP3BO95985 862 aaKnown RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 PDGFBP01127 241 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 IGLV2-14P01704 120 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 MMP3P08254 477 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 RAB40ALP0C0E4 278 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 PLA2G4BP0C869 781 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 G6PDP11413 515 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 MYL6BP14649 208 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 AREGP15514 252 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 NR1D1P20393 614 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 KELP23276 732 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 SULT1E1P49888 294 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 SMSP52788 366 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 RPS13P62277 151 aaKnown RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 CDK3Q00526 305 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 GHRHRQ02643 423 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 GAMTQ14353 236 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 LPIN1Q14693 890 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 CEP55Q53EZ4 464 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 FASTKD1Q53R41 847 aaKnown RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 ZDHHC20Q5W0Z9 365 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 TXNRD3NBQ6F5E7 133 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 NCAPH2Q6IBW4 605 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 MACC1Q6ZN28 852 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 PLEKHM3Q6ZWE6 761 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 ELMOD2Q8IZ81 293 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 Q8N1X5 172 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 FBXW8Q8N3Y1 598 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 SPATA6LQ8N4H0 392 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 BOLLQ8N9W6 283 aaKnown RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 SEMA6DQ8NFY4 1073 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 OR52E1Q8NGJ3 308 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 RAD54LQ92698 747 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 ERGIC1Q969X5 290 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 EME1Q96AY2 570 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 CHFRQ96EP1 664 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 SAMD8Q96LT4 415 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 LRRC3BQ96PB8 259 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 TEX13AQ9BXU3 409 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 TRIM6Q9C030 488 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 DDX47Q9H0S4 455 aaKnown RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 WNT5BQ9H1J7 359 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 PPP1R3EQ9H7J1 279 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 LMAN1LQ9HAT1 526 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 GPN1Q9HCN4 374 aaPredicted RBP4.09□□□□□ -1.75
VPS13D-207ENST00000476169 SPAG4Q9NPE6 437 aa4.09□□□□□ -1.75
VPS13D-207ENST00000476169 PPANQ9NQ55 473 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms