RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 ELMOD1Q8N336 334 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 DGCR14Q96DF8 476 aaKnown RBP16.35■□□□□ 0.21
TVP23B-202ENST00000476139 HTATIP2Q9BUP3 242 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 ACTL8Q9H568 366 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 RIC8BQ9NVN3 520 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 HS3ST2Q9Y278 367 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 PIKFYVEQ9Y2I7 2098 aa16.35■□□□□ 0.21
TVP23B-202ENST00000476139 KRT87PA6NCN2 255 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 MTX2O75431 263 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 PLOD1Q02809 727 aaPredicted RBP16.34■□□□□ 0.21
TVP23B-202ENST00000476139 LSAMPQ13449 338 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 NR6A1Q15406 480 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 AP5B1Q2VPB7 878 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 MACC1Q6ZN28 852 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 EFL1Q7Z2Z2 1120 aaKnown RBP16.34■□□□□ 0.21
TVP23B-202ENST00000476139 NAT16Q8N8M0 369 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 SORCS1Q8WY21 1168 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 NCSTNQ92542 709 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 TMEM125Q96AQ2 219 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 RHBDF1Q96CC6 855 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 ECHDC3Q96DC8 303 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 VCX3AQ9NNX9 186 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 COMMD3-BMI1R4GMX3 469 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 GLUD1P00367 558 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 ADH1AP07327 375 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 OXTRP30559 389 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 CCR7P32248 378 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 NAA20P61599 178 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 TEAD2Q15562 447 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 SGO1Q5FBB7 561 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 CCDC149Q6ZUS6 474 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 TMEM199Q8N511 208 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 PBXIP1Q96AQ6 731 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 LYSMD1Q96S90 227 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 BBS2Q9BXC9 721 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 BRD9Q9H8M2 597 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 TMCO1Q9UM00 188 aa16.34■□□□□ 0.21
TVP23B-202ENST00000476139 SMIM31A0A1B0GVY4 71 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 ARHGAP10A1A4S6 786 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 AGAP14A8MT82 685 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 SEC24DO94855 1032 aaPredicted RBP16.33■□□□□ 0.21
TVP23B-202ENST00000476139 OTCP00480 354 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 DGKQP52824 942 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 HMGCS1Q01581 520 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 PRKCQQ04759 706 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 ARHGEF7Q14155 803 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 GPR33Q49SQ1 333 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 AHI1Q8N157 1196 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 MTFMTQ96DP5 389 aaKnown RBP16.33■□□□□ 0.21
TVP23B-202ENST00000476139 CD244Q9BZW8 370 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 WWOXQ9NZC7 414 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 ZNHIT2Q9UHR6 403 aa16.33■□□□□ 0.21
TVP23B-202ENST00000476139 CLIC3O95833 236 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 HSD17B1P14061 328 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 GRIK2Q13002 908 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 TBCELQ5QJ74 424 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 PLPP4Q5VZY2 271 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 NANOGP8Q6NSW7 305 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 CBARPQ8N350 705 aaPredicted RBP16.33■□□□□ 0.2
TVP23B-202ENST00000476139 ALG2Q9H553 416 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 NANOGQ9H9S0 305 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 LIN28AQ9H9Z2 209 aaKnown RBP16.33■□□□□ 0.2
TVP23B-202ENST00000476139 CXXC1Q9P0U4 656 aaPredicted RBP16.33■□□□□ 0.2
TVP23B-202ENST00000476139 TMPRSS11EQ9UL52 423 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 ANGPTL3Q9Y5C1 460 aa16.33■□□□□ 0.2
TVP23B-202ENST00000476139 EEDO75530 441 aaKnown RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 STAMBPO95630 424 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 GNAO1P09471 354 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 WEE1P30291 646 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 NSG1P42857 185 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 HSPA14Q0VDF9 509 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 ZXDCQ2QGD7 858 aaPredicted RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 PDCD4Q53EL6 469 aaKnown RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 TMEM215Q68D42 235 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 KRT80Q6KB66 452 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 PRMT9Q6P2P2 845 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 USP45Q70EL2 814 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 DUS3LQ96G46 650 aaKnown RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 PHF12Q96QT6 1004 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 MTG2Q9H4K7 406 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 SUN2Q9UH99 717 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 CCL27Q9Y4X3 112 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 LTBP2Q14767 1821 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 LOC730098B7Z3J9 87 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 ARPC2O15144 300 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 PCSK6P29122 969 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 HMOX2P30519 316 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 GGT5P36269 586 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 GSK3BP49841 420 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 NTHL1P78549 312 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 LIPEQ05469 1076 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 PRKG2Q13237 762 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 PTGR1Q14914 329 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 SLC44A4Q53GD3 710 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 CARD16Q5EG05 197 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 CYP20A1Q6UW02 462 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 SPRED2Q7Z698 418 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 CHERPQ8IWX8 916 aaKnown RBP16.32■□□□□ 0.2
TVP23B-202ENST00000476139 TRIML2Q8N7C3 387 aa16.32■□□□□ 0.2
TVP23B-202ENST00000476139 COPS8Q99627 209 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms