RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CCDC166P0CW27 439 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MPC1LP0DKB6 136 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 C6P13671 934 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A6P19224 532 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 HIST1H2ADP20671 130 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SAT1P21673 171 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A1P22309 533 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A4P22310 534 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 LHCGRP22888 699 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 DRD3P35462 400 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A3P35503 534 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 UGT1A5P35504 534 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 ETV3P41162 512 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 WASP42768 502 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SERPINB4P48594 390 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 ATP1A2P50993 1020 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 DNAJB13P59910 316 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CBX1P83916 185 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MPP1Q00013 466 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 GALNT1Q10472 559 aaPredicted RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 RPA4Q13156 261 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PTK2BQ14289 1009 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PTPRCAPQ14761 206 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PDK4Q16654 411 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 ATP13A5Q4VNC0 1218 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 GPRC6AQ5T6X5 926 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 AGBL4Q5VU57 503 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 LVRNQ6Q4G3 990 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 HSD11B1LQ7Z5J1 315 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CPLX4Q7Z7G2 160 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CLEC14AQ86T13 490 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 TRIM69Q86WT6 500 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SPATS2Q86XZ4 545 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PIANPQ8IYJ0 282 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 ZNF366Q8N895 744 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 ANKRD42Q8N9B4 389 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CADM4Q8NFZ8 388 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PPP1R14CQ8TAE6 165 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MAGEC3Q8TD91 643 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PPP4R1Q8TF05 950 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 KIAA1191Q96A73 305 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SKA1Q96BD8 255 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CHMP6Q96FZ7 201 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 HIC2Q96JB3 615 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SCYL1Q96KG9 808 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 HIST1H2AHQ96KK5 128 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CNDP1Q96KN2 507 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 FOPNLQ96NB1 174 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 HIST1H2AJQ99878 128 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PAIP2Q9BPZ3 127 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 TRIM56Q9BRZ2 755 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CCM2Q9BSQ5 444 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 H2AFJQ9BTM1 129 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 TRMOQ9BU70 441 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PITPNM3Q9BZ71 974 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MTG2Q9H4K7 406 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 EML4Q9HC35 981 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MRGBPQ9NV56 204 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 THAP1Q9NVV9 213 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 MARCH4Q9P2E8 410 aaPredicted RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PCOLCE2Q9UKZ9 415 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 CYP8B1Q9UNU6 501 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 RAXQ9Y2V3 346 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 TNPO3Q9Y5L0 923 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 LAMA5O15230 3695 aa6.91□□□□□ -1.3
SHQ1-207ENST00000475558 HELZ2Q9BYK8 2649 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 SETXQ7Z333 2677 aaKnown RBP6.91□□□□□ -1.3
SHQ1-207ENST00000475558 PTPRBP23467 1997 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 A0A1B0GTW7 788 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 A0A1W2PP55 124 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 IGLON5A6NGN9 336 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 OR51F1A6NGY5 319 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 GOLGA8RI6L899 631 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 CACNB4O00305 520 aaPredicted RBP6.9□□□□□ -1.3
SHQ1-207ENST00000475558 FPGTO14772 594 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 TNFRSF10CO14798 259 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 LIN7AO14910 233 aaPredicted RBP6.9□□□□□ -1.3
SHQ1-207ENST00000475558 ZBTB14O43829 449 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 KDM1AO60341 852 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 PLIN3O60664 434 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 CBFA2T3O75081 653 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 SPAG7O75391 227 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 PIAS1O75925 651 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 SLC4A1P02730 911 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 RPN2P04844 631 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 C8GP07360 202 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 BPGMP07738 259 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 ZNF883P0CG24 379 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 SLC35E2BP0CK96 405 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 MYL2P10916 166 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 SNRPBP14678 240 aaKnown RBP6.9□□□□□ -1.3
SHQ1-207ENST00000475558 PCSK2P16519 638 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 NDUFV2P19404 249 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 ATP5F1P24539 256 aaPredicted RBP6.9□□□□□ -1.3
SHQ1-207ENST00000475558 HTR1BP28222 390 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 AKT1P31749 480 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 AKT2P31751 481 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 LSP1P33241 339 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 ETV4P43268 484 aa6.9□□□□□ -1.3
SHQ1-207ENST00000475558 TPMTP51580 245 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms