RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 UBA6A0AVT1 1052 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 CDC14CA4D256 554 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 CLEC18AA5D8T8 446 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TLCD2A6NGC4 264 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 SLC9B1P1A6NJY1 282 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 BTNL10A8MVZ5 291 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 C21orf140B9A014 251 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 HCRTR1O43613 425 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 CAPN1P07384 714 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 ATP1B2P14415 290 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 POLR2CP19387 275 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PSMA3P25788 255 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PTPN4P29074 926 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 AKT1P31749 480 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 MC4RP32245 332 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PRLHRP49683 370 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 ZNF75DP51815 510 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PMS2P54278 862 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 MLLT10P55197 1068 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 RWDD2BP57060 319 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TUBB4BP68371 445 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 MC1RQ01726 317 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 ABRQ12979 859 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 KLF1Q13351 362 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 DNASE1L3Q13609 305 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 IL10RAQ13651 578 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TUBB2AQ13885 445 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PLCL1Q15111 1095 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 ITPRIPL1Q6GPH6 555 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TCTN3Q6NUS6 607 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 KLHL35Q6PF15 583 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 CLEC18BQ6UXF7 455 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 SNX20Q7Z614 316 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 BPHLQ86WA6 291 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 SERPINA9Q86WD7 417 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 GAS2L3Q86XJ1 694 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 KMT5CQ86Y97 462 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TMTC1Q8IUR5 882 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TMEM139Q8IV31 216 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 CDKL3Q8IVW4 592 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 CLEC18CQ8NCF0 446 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 DNAJC1Q96KC8 554 aaKnown RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PANX2Q96RD6 677 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TBL1YQ9BQ87 522 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TUBB2BQ9BVA1 445 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 ZCCHC2Q9C0B9 1178 aaKnown RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 TWSG1Q9GZX9 223 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 KCND1Q9NSA2 647 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 ANAPC2Q9UJX6 822 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 KCND3Q9UK17 655 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PACSIN2Q9UNF0 486 aaPredicted RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 BTRCQ9Y297 605 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 AAR2Q9Y312 384 aaKnown RBP6.83□□□□□ -1.32
HDAC3-207ENST00000475549 PCDHB3Q9Y5E6 796 aa6.83□□□□□ -1.32
HDAC3-207ENST00000475549 C17orf113A0A1B0GUU1 675 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 MACROD2A1Z1Q3 448 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 MROH6A6NGR9 719 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 BHMG1C9JSJ3 638 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 H3BMH7 237 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 H7C0S8 307 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 MEN1O00255 615 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 BTN3A1O00481 513 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 SCRG1O75711 98 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 TJP3O95049 919 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ZBTB11O95625 1053 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CRTAMO95727 393 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 MT-ND3P03897 115 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CTSBP07858 339 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 PVRP15151 417 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ST6GAL1P15907 406 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ACRV1P26436 265 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 PRDX3P30048 256 aaKnown RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 RORAP35398 523 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CYLC1P35663 651 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 GRIA1P42261 906 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 TNNT3P45378 269 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 PREPP48147 710 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 NAP1L1P55209 391 aaKnown RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ACY1Q03154 408 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 SEMA5AQ13591 1074 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 PRPSAP1Q14558 356 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ZIC1Q15915 447 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 DBN1Q16643 649 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 PARP6Q2NL67 630 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 LACTB2Q53H82 288 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CCDC181Q5TID7 509 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 CPZQ66K79 652 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 NAPRTQ6XQN6 538 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ASB18Q6ZVZ8 466 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 OOSP2Q86WS3 158 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 APLFQ8IW19 511 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 TMEM151BQ8IW70 566 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ADGRF3Q8IZF5 1079 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 TAB3Q8N5C8 712 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-207ENST00000475549 ACVR1CQ8NER5 493 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 OR52E1Q8NGJ3 308 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 OR1L3Q8NH93 324 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 FLVCR1-AS1Q8TAF5 88 aa6.82□□□□□ -1.32
HDAC3-207ENST00000475549 SLC35B2Q8TB61 432 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms