RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 PGBD3Q8N328 593 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 GBP7Q8N8V2 638 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 DENND6BQ8NEG7 585 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 HM13Q8TCT9 377 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 UBTD2Q8WUN7 234 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 ASB11Q8WXH4 323 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 CCT6BQ92526 530 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 LRRC37BQ96QE4 947 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 NELL2Q99435 816 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 SLC12A9Q9BXP2 914 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 BTBD1Q9H0C5 482 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 WWOXQ9NZC7 414 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 USP36Q9P275 1121 aaKnown RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 HEY2Q9UBP5 337 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 EIF2B4Q9UI10 523 aaKnown RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 PCTPQ9UKL6 214 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 APOBEC2Q9Y235 224 aaKnown RBP13.46□□□□□ -0.25
TRAF4-210ENST00000475329 TMEM98Q9Y2Y6 226 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 PLXND1Q9Y4D7 1925 aa13.46□□□□□ -0.25
TRAF4-210ENST00000475329 LRP4O75096 1905 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 C17orf113A0A1B0GUU1 675 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 GFYI3L273 518 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 ZNF195O14628 629 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 HGSO14964 777 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-210ENST00000475329 CHUKO15111 745 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 DIAPH2O60879 1101 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 MLYCDO95822 493 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 GUCA1CO95843 209 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 IGLV3-19P01714 112 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 ANXA5P08758 320 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 ACSL1P33121 698 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 PREPP48147 710 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 IDH3AP50213 366 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 HNRNPH2P55795 449 aaKnown RBP13.45□□□□□ -0.26
TRAF4-210ENST00000475329 PLOD1Q02809 727 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-210ENST00000475329 LCP2Q13094 533 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 PCBP2Q15366 365 aaKnown RBP eCLIP13.45□□□□□ -0.264e-7■■■□□ 17.9
TRAF4-210ENST00000475329 LRRTM4Q86VH4 590 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 ZNF547Q8IVP9 402 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 TCAIMQ8N3R3 496 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 TSTD1Q8NFU3 115 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 OR2L2Q8NH16 312 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 STON2Q8WXE9 905 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 DLG3Q92796 817 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 FOXJ1Q92949 421 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 SKA1Q96BD8 255 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 RILPQ96NA2 401 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 FOPNLQ96NB1 174 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 NSUN5Q96P11 429 aaKnown RBP13.45□□□□□ -0.26
TRAF4-210ENST00000475329 LGR4Q9BXB1 951 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 PARVBQ9HBI1 364 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 CD93Q9NPY3 652 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 ITM2CQ9NQX7 267 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 ARL15Q9NXU5 204 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 THEGQ9P2T0 379 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 ZFP69BQ9UJL9 534 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 PTBP2Q9UKA9 531 aaKnown RBP13.45□□□□□ -0.26
TRAF4-210ENST00000475329 PDE10AQ9Y233 779 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 STK38LQ9Y2H1 464 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 OR1A2Q9Y585 309 aa13.45□□□□□ -0.26
TRAF4-210ENST00000475329 KLHL33A6NCF5 533 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 C19orf67A6NJJ6 358 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 TRPC5OSA6NMA1 111 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 H3BM21 787 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 E2F3O00716 465 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 SLC31A1O15431 190 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 GRID2O43424 1007 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 PSIP1O75475 530 aaKnown RBP13.44□□□□□ -0.26
TRAF4-210ENST00000475329 POP7O75817 140 aaKnown RBP13.44□□□□□ -0.26
TRAF4-210ENST00000475329 MATN4O95460 622 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 SEMA4FO95754 770 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 CATP04040 527 aaKnown RBP13.44□□□□□ -0.26
TRAF4-210ENST00000475329 HIST1H2AGP0C0S8 130 aaPredicted RBP13.44□□□□□ -0.26
TRAF4-210ENST00000475329 TSPAN8P19075 237 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 HIST1H2ADP20671 130 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 MAP4P27816 1152 aaKnown RBP13.44□□□□□ -0.26
TRAF4-210ENST00000475329 SERPINB3P29508 390 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 RPIAP49247 311 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 CDH13P55290 713 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 AP1S2P56377 157 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 ARHGAP8P85298 464 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 RBBP7Q16576 425 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 PLA2G4EQ3MJ16 856 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 FBXO48Q5FWF7 155 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 METTL2BQ6P1Q9 378 aaKnown RBP13.44□□□□□ -0.26
TRAF4-210ENST00000475329 EPGNQ6UW88 154 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 MTDHQ86UE4 582 aaKnown RBP13.44□□□□□ -0.26
TRAF4-210ENST00000475329 RASGRP3Q8IV61 690 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 UBALD2Q8IYN6 164 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 CFAP206Q8IYR0 622 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 SIX5Q8N196 739 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 OXR1Q8N573 874 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 FITM2Q8N6M3 262 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 OR56A4Q8NGH8 313 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 MCOLN3Q8TDD5 553 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 TRPC4APQ8TEL6 797 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 AGAP11Q8TF27 550 aa13.44□□□□□ -0.26
TRAF4-210ENST00000475329 RHBDF1Q96CC6 855 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms